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berkeley_reactor_200306_planktonic_scaffold_23420_106

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(111535..112617)

Top 3 Functional Annotations

Value Algorithm Source
putative lipopolysaccharide heptosyltransferase II (EC:2.4.-.-) similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 358.0
  • Bit_score: 201
  • Evalue 2.20e-49
Lipopolysaccharide heptosyltransferase II n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSA4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 340.0
  • Bit_score: 354
  • Evalue 9.50e-95
Lipopolysaccharide heptosyltransferase II {ECO:0000313|EMBL:EEF57274.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 340.0
  • Bit_score: 354
  • Evalue 1.30e-94

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1083
TTGAAAATCCTCATCCTCAAGCCGAGCTCCCTGGGCGACGTGATCCATGCGTTGCCGGTGTTGCGCTTGTTGAAATCGCACTTTCGCGCGGCGGAAATTTTCTGGTGGATTGATTCCGCGCTCGCCCCGCTCATTGACGGCGATCCCGACTTGACCGGCGTCGTCCGTTTCGAGCGCAAACGCTGGGGCAAACCGCGTCACTGGCCGGAAATGGTGCGCAGCATCCGCTGGCTGCGCGCGCAGCACTTCGATCTCGTCATTGACCTCCAATGCCTGGCCCGCAGCGGCGCGTTCGCCTGGCTCGCCAACGGCCGGCACCTGGTGGGGCTGGACGAAGTGCGCGAAGGCGCCCGCGGTTTTTATGATCTGGCCGTGCCGCGCGCCAGCTTCCACACCCACGCGGTGGACTGGTATCTGGCCGTGCTGCCGCAGCTCGGCGTGCCCGTGCATGAACAATTTGTCTGGCTGCCCGAGCGCCCAGAAATCGCCGCCGAAGTCCGGCGCAAATGGAACCTTGAAGCCGGCCCCGTTCCGCCAGCCGTCGCGCGTCAACGCGCTGCCGGGACGGACTCCGGCCGCGATCCGCGTTGGATCGCCTTCCAGCCCGGCGCGCGCTGGCCCAACAAGCGCTGGCCGGTGAAACATTTCACCGGCCTCATCCGCCTGCTGGCGCAACAATTCCCCGCCACCCGTTTTGCAATTCTCGGCGGCCGGGAAGATCAAGCGCTGGGCCAGGCGCTTTTCGAATCCGCGCCGGATCGTTGTCTCAATTTGTGCGGCACCACGTCGCTGCCGGAAATGATCGAATGGGTGCGTCTCTGCGATTTGCTGATCACCAACGACACCGGCCCCATGCACGTGGCCGCCGCCATGAACAAGCCGTTGGTCGCCTTGTTCGGCCCCACCGAACCGCGCCGCACCGGTCCGTATGGCCAGTTGCACAACGTGCTGCGCGTGGAACTCCCCTGCTCTCCCTGCCTTTCGGCGCGGTGTCATTTTGAAAAACCCGAGGAATGTCTCCAGGCCCTCCCGCCGGCCCGCGTGTTCGATCACGTCCAAAAACTCCTCCGGGCGCGCGCTTGA
PROTEIN sequence
Length: 361
LKILILKPSSLGDVIHALPVLRLLKSHFRAAEIFWWIDSALAPLIDGDPDLTGVVRFERKRWGKPRHWPEMVRSIRWLRAQHFDLVIDLQCLARSGAFAWLANGRHLVGLDEVREGARGFYDLAVPRASFHTHAVDWYLAVLPQLGVPVHEQFVWLPERPEIAAEVRRKWNLEAGPVPPAVARQRAAGTDSGRDPRWIAFQPGARWPNKRWPVKHFTGLIRLLAQQFPATRFAILGGREDQALGQALFESAPDRCLNLCGTTSLPEMIEWVRLCDLLITNDTGPMHVAAAMNKPLVALFGPTEPRRTGPYGQLHNVLRVELPCSPCLSARCHFEKPEECLQALPPARVFDHVQKLLRARA*