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berkeley_reactor_200306_planktonic_scaffold_23420_123

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 148139..148891

Top 3 Functional Annotations

Value Algorithm Source
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:EEF62213.1}; EC=4.2.99.18 {ECO:0000313|EMBL:EEF62213.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.2
  • Coverage: 250.0
  • Bit_score: 432
  • Evalue 2.70e-118
Exodeoxyribonuclease III Xth n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDR7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 250.0
  • Bit_score: 432
  • Evalue 1.90e-118
exodeoxyribonuclease III similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 251.0
  • Bit_score: 357
  • Evalue 1.70e-96

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 753
GTGAAACTGATTTCCTGGAACGTCAACGGCCTGCGCGCCGTGCTGAAGAAAAATTTTCTCGAATTCCTCGACGCCGAGAAGCCCGACATCCTGTGCCTGCAGGAAACCAAATGCACGCCGGACGATGTGGAGCAGCTCTGGCCCGCCAGCTACACGACCTTCTGGAATTGCGCCGAAAAGAAGGGCTATTCCGGCACCGCCATTTTCACCCGGACCAAGCCGGTCAACGTCATCCCGCACATTGACATCAGCGAGCACGACCGCGAAGGCCGCGTGCTTGCCGCCGAGTATGCCGATTTTTTTCTCGTCAACGTCTATGTGCCGAATTCCAAACGCGACTTGTCCCGGCTCGATTATCGCCAGCGCTGGGATGCCGACTTCCTGGCTTACTTGAAAAAGTTGGAAAAGAAAAAGCCCGTGATTTTCTGCGGCGACCTCAACGTGGCGCACACGGAAATTGACCTGGCCAATCCCAAGGCCAACGTCCGCAACCACGGCTTCACCATTGAGGAACGCAGCGGCTTCACCAACTTCGTGAATGCCGGTTTTGTGGACACCTTCCGCGAATTCGAGCCGGGCGGCGGCCATTACACGTGGTGGAGCCAGATGGGCACCGCGCGTGCCCGGAACATCGGCTGGCGCCTGGATTATTTTCTCATTTCAAAAGCCTTGCGCCCGCGTCTGAAAAAAGCCTTCATCCAACCGTCAGTCAAGGGCAGCGATCATTGTCCGGTGGGCATCGAACTGAAATAG
PROTEIN sequence
Length: 251
VKLISWNVNGLRAVLKKNFLEFLDAEKPDILCLQETKCTPDDVEQLWPASYTTFWNCAEKKGYSGTAIFTRTKPVNVIPHIDISEHDREGRVLAAEYADFFLVNVYVPNSKRDLSRLDYRQRWDADFLAYLKKLEKKKPVIFCGDLNVAHTEIDLANPKANVRNHGFTIEERSGFTNFVNAGFVDTFREFEPGGGHYTWWSQMGTARARNIGWRLDYFLISKALRPRLKKAFIQPSVKGSDHCPVGIELK*