name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_23420_120
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
140668..141264
|
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Dephospho-CoA kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF05_9BACT
coaE; dephospho-CoA kinase
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_121
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(141979..145554)
|
Immunoglobulin V-set domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIC4_9BACT
Immunoglobulin V-set domain protein {ECO:0000313|EMBL:EEF60385.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_122
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
145833..148031
|
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
1,4-alpha-glucan branching enzyme GlgB n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XF06_9BACT
1,4-alpha-glucan-branching protein
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_123
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
148139..148891
|
Exodeoxyribonuclease III Xth {ECO:0000313|EMBL:EEF62213.1}; EC=4.2.99.18 {ECO:0000313|EMBL:EEF62213.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Exodeoxyribonuclease III Xth n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XDR7_9BACT
exodeoxyribonuclease III
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_124
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
149001..150473
|
Radical SAM domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZW83_OPITP
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ACB76835.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_125
R_RIF_OP11_01_40_20, RIF-OP11-1, Microgenomates, Bacteria
|
Not on your lists |
comp(150574..151017)
|
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_01_40_20_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_126
unknown
|
Not on your lists |
comp(151245..151958)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_23420_127
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
152140..152403
|
hypothetical protein n=1 Tax=Methylophilus methylotrophus RepID=UPI000363B40A
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_128
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria
|
Not on your lists |
152422..153705
|
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000368B927
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKC83382.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_129
unknown
|
Not on your lists |
comp(153896..154219)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_23420_130
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
154832..155389
|
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ7_OPITP
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB74673.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_131
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
155432..157633
|
Serine/threonine protein kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ8_OPITP
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACB74674.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_132
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
158101..165117
|
Autotransporter-associated beta strand repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAK4_9BACT
Autotransporter-associated beta strand repeat protein {ECO:0000313|EMBL:EEF63039.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
conserved protein of unknown function; RTX toxins and related Ca2+-binding domain
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_133
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria
|
Not on your lists |
165252..166085
|
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003820FF0
prepilin-type N-terminal cleavage/methylation domain
Tax=RBG_16_Planctomycetes_55_9_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_134
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria
|
Not on your lists |
166461..171905
|
coagulation factor 5/8 type domain-containing protein (EC:2.7.10.1)
Ricin B lectin n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CYT0_9BACT
Ricin B lectin {ECO:0000313|EMBL:EDY20621.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_135
RBG_13_Planctomycetes_60_9_curated, Phycisphaerae, Planctomycetes, Bacteria
|
Not on your lists |
171919..174888
|
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase id=2692626 bin=GWF2_Lentisphaerae_49_21 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
Tax=RBG_13_Planctomycetes_60_9_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_136
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
174899..176341
|
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H388_ACTM4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL87475.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_137
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
176368..177432
|
Carbohydrate binding family 6 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TF24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KEZ21102.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
endoglucanase
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_trna_2
unknown
|
Not on your lists |
177768..177842
|
transferRNA Pro
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_138
Candidatus Magnetobacterium bavaricum, Candidatus Magnetobacterium, Nitrospirales, Nitrospira, Nitrospirae, Bacteria
|
Not on your lists |
178241..178954
|
CHAP domain./Lectin C-type domain n=1 Tax=Eubacterium rectale DSM 17629 RepID=D6E4F0_9FIRM
Secreted protein containing C-type lectin domain protein {ECO:0000313|EMBL:KJU84923.1}; TaxID=29290 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Candidatus Magnetobacterium.;" source="Candidatus Magnetobacterium bavaricum.;"
CHAP domain./Lectin C-type domain.
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_139
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
179170..180018
|
RNA polymerase sigma factor n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2Z3_PIRSD
ECF subfamily RNA polymerase sigma-24 subunit
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_140
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(180340..181107)
|
short-chain dehydrogenase n=1 Tax=Nodosilinea nodulosa RepID=UPI0002FB24B7
short-chain dehydrogenase/reductase SDR
Oxidoreductase {ECO:0000313|EMBL:KIJ72967.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_141
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
181251..182159
|
Transcriptional regulator, LysR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ57_9BACT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF60095.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
transcriptional regulator, LysR family
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_142
Methylophilaceae bacterium 11, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
182581..182979
|
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00037B33EB
Uncharacterized protein {ECO:0000313|EMBL:EUJ09364.1}; TaxID=1101195 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae.;" source="Methylophilaceae bacterium 11.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_143
R_RIF_OD1_09_44_41, RIF-OD1-9, Parcubacteria, Bacteria
|
Not on your lists |
183274..184290
|
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T1BWL8_9ZZZZ
phage protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_09_44_41_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_144
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(184529..187417)
|
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Glycine dehydrogenase (decarboxylating) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGH7_9BACT
glycine dehydrogenase, decarboxylating
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_145
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
187652..190171
|
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA gyrase subunit B n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG8_9BACT
gyrB; DNA gyrase subunit B
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_146
unknown
|
Not on your lists |
190186..190545
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_23420_147
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria
|
Not on your lists |
190551..190979
|
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_148
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
190994..193663
|
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
DNA gyrase subunit A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG7_9BACT
gyrA; DNA gyrase subunit A
|