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berkeley_reactor_200306_planktonic_scaffold_23420_144

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(184529..187417)

Top 3 Functional Annotations

Value Algorithm Source
Glycine dehydrogenase (decarboxylating) {ECO:0000256|HAMAP-Rule:MF_00711}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00711};; Glycine cleavage system P-protein {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine decarboxylase {ECO:0000256|HAMAP-Rule:MF_00711}; Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|HAMAP-Rule:MF_00711}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.7
  • Coverage: 968.0
  • Bit_score: 1345
  • Evalue 0.0
Glycine dehydrogenase (decarboxylating) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGH7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 968.0
  • Bit_score: 1345
  • Evalue 0.0
glycine dehydrogenase, decarboxylating similarity KEGG
DB: KEGG
  • Identity: 66.1
  • Coverage: 967.0
  • Bit_score: 1286
  • Evalue 0.0

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2889
ATGGATTCGACCGAACCGATTTTTGCCAACCCAGACCCGTTTATCCGCCGCCACATCGGCCCCAACGCCGCCGAAACCGCCGAGATGCTCGCCCTGCTCGGCCGCAAAAACCTCGACGACCTGGTGGACGCCGCCGTCCCGCAAAAAATCCGGCTCGACCGCGCACTGAACCTGCCCGCCGCCAAAAGTGAATTTGAGGCATTGGCCGAAATCCGCCGCATCGCTTCCGAGAACAAGGTGTTTCGCTCGTTCATCGGACAGGGTTATTACGACACCATCACGCCGCCCGTCATCCAGCGCAGCGTGCTCGAAAATCCGGGCTGGTATACGCAATACACGCCCTACCAAGCCGAAATTTCCCAGGGCCGGCTCGAAGCCCTGCTGAATTTCCAGACAATGGTTTCCGATCTCACCGCGCTCGACATCGCCAACGCCTCGCTGCTCGACGAAGCCACCGCCTGCGCCGAAGCCATGATGATGAGCCACCGGTTCAAAGGCACCAATGGACGCAACCGGTTCTTCGTTTCCGAAGCCTGTCATCCGCAAAACATCCACGTCGTCCAGACGCGCGCCCAGGCGCTCGGCCTCGAAGTGGTCGTCGGTAATCACAAAAATTTTGAATTCACCGACAACGTTTTCGGCGCGCTCGTGCAATATCCCGACACGTTTGGCGCGATTCATGATTTCTCCGGCTTCGCCGAAAAAGCCCACGCCGCCGGCGCGATGCTCACCGTCGCCACCGATTTGCTCGCGCTCACGCTCATCAAGCCGCCGGGCGAATTTGGCGCCGACATCGCCGTCGGCAGCGCCCAACGCTTCGGCGTGCCGCTCGGCTACGGCGGACCGCACGCCGGCTTCTTCGCCACCAAGGACGAATTCAAGCGCCAGATGCCCGGCCGCATCGTGGGTGTTTCCAAAGATTCGCGCGGCAAGCCGGCCTTGCGTCTCGCGCTCGGCACCCGCGAACAACACATCCGCCGCGAAAAAGCCACTAGCAACATCTGCACGGCGCAGGCACTGCTCGCCAACATGGCCTCGCTCTACGCATGCTATCACGGACCGGAAGGACTGAAGCAGATTGCCAATCGAGTTCACCTGTTTGCCGACCATTTTGCAAGCGCGGTAATGGCAAAAGGTTTCACCGTTGATTACGGCGAATTTTTTGACACAGTTGGAGTTGAATGCCCTTCCACCGAAAAACGCGAAGAAATCCTTCGCCGCGCAACCGAGCAAGCAGTTAACTTACGCCCGCATGGAACGAACGAGATTTTTGTTTCGTTTGACGAAACCATCAATACTTCAACCTTGGCTAAGTTAATCTCGATCTTCTCAGGCGAAATCGTCGAATCCGTCAGTTTCGGCAAGAGCTTGAAAGAAATGGAGCTTGGCTTTCGCGATGAATTCAAACGCACCAGCAAATTTCTTCAACATCCGGTCTTTAACCGCTACCACAGCGAGACCGAGATGCTCCGCTACATCAAGCGGCTCGAATCCCGCGACCTGTCGCTCACGGCTTCGATGATTCCGCTCGGCTCTTGCACCATGAAACTGAACGCGGCGGCGGAAATGTTTCCCGTCTCATGGCCGGAATTTGCGAAGCTGCATCCGTTCGCCCCGCTCGGCCAGGCGCGCGGCTACCAGATTTTGTTTCAGAACCTCGAAGACTGGCTCGCGGAAATCACCGGCTTTGCCGGCATTTCGCTCCAGCCGAACGCCGGTTCGCAGGGCGAATACGCCGGACTGCTCGTCATCCGCGCCTATCACGAAGCGCGCAATGAATCGCACCGCAACGTTTGCCTGATTCCCAGTTCAGCGCACGGCACCAATCCCGCCAGCGCCGTGATGGCCGGCATGAAGGTCGTTTCCGTGGCCTGCGACGAACGCGGCAACATTGACGTCGCCGATTTGCGCGCGAAAGCCGGGGCGCATAAAAATGATTTGTCGTGCCTCATGGTCACCTACCCCAGCACGCACGGCGTGTTCGAGGAAACCATCCGCGAAATCTGCGACATCATTCACGCGCACGGCGGACAGGTTTACATGGACGGTGCGAACATGAACGCCCAGGTTGGTCTCACCAGCCCCGGCCACATCGGCGCCGACGTCTGCCATCTGAACCTGCACAAAACCTTTTGCATTCCGCACGGCGGCGGCGGACCCGGCGTCGGCCCGATTGGCGTGGCGAAACATCTCGTTCCCTTCCTTCCCAGTCATCCGGTGTTCACCGACCGGCTCGCGGAAAATCATTCCAAACAACACATCGGTCCCGTGGCCGCCGCGCCATGGGGCAGCGCCAGCATCCTGCCAATTTCCTGGATGTATATCGCCATGACCGGCGCGGACGGACTCACCGACGCCACAAAATACGCCATTCTCAACGCCAACTACATTTCCAAGCGCTTGGAAAATTATTTCCCCACGCTCTACCGCAGCCACGGCCTCGTCGCGCACGAATGTATCCTCGACCTGCGCGCGTTCAAAAGCGTCACCGCCGAAGACGTCGCCAAGCGCCTAATGGATTACGGCTTCCACGCGCCGACCTTGAGCTGGCCCGTCGCCGGCACGCTCATGGTCGAACCCACCGAAAGCGAATCCAAATACGAACTGGACCGCTTCTGCGACGCCATGATCGCCATCCACGCCGAAATGACCGCTGTGGAAACCGGCGCCGTGGACGCCAAAAACAACCTGCTCAAGAACGCCCCGCACACCGCCGACCAGATCGCCAGCGACAATTGGAATCGTCCTTACACCCGCGAACAAGCGGCGTTCCCAGCCAAGAGCCTGCTGGAATACAAATTCTGGCCTCACGTTGCCCGCGTGGACAATGTGTTTGGCGACCGCAACCCGGTTTGCTCGTGTGTCGGGATGGAAGCTTACCAAAGCTGA
PROTEIN sequence
Length: 963
MDSTEPIFANPDPFIRRHIGPNAAETAEMLALLGRKNLDDLVDAAVPQKIRLDRALNLPAAKSEFEALAEIRRIASENKVFRSFIGQGYYDTITPPVIQRSVLENPGWYTQYTPYQAEISQGRLEALLNFQTMVSDLTALDIANASLLDEATACAEAMMMSHRFKGTNGRNRFFVSEACHPQNIHVVQTRAQALGLEVVVGNHKNFEFTDNVFGALVQYPDTFGAIHDFSGFAEKAHAAGAMLTVATDLLALTLIKPPGEFGADIAVGSAQRFGVPLGYGGPHAGFFATKDEFKRQMPGRIVGVSKDSRGKPALRLALGTREQHIRREKATSNICTAQALLANMASLYACYHGPEGLKQIANRVHLFADHFASAVMAKGFTVDYGEFFDTVGVECPSTEKREEILRRATEQAVNLRPHGTNEIFVSFDETINTSTLAKLISIFSGEIVESVSFGKSLKEMELGFRDEFKRTSKFLQHPVFNRYHSETEMLRYIKRLESRDLSLTASMIPLGSCTMKLNAAAEMFPVSWPEFAKLHPFAPLGQARGYQILFQNLEDWLAEITGFAGISLQPNAGSQGEYAGLLVIRAYHEARNESHRNVCLIPSSAHGTNPASAVMAGMKVVSVACDERGNIDVADLRAKAGAHKNDLSCLMVTYPSTHGVFEETIREICDIIHAHGGQVYMDGANMNAQVGLTSPGHIGADVCHLNLHKTFCIPHGGGGPGVGPIGVAKHLVPFLPSHPVFTDRLAENHSKQHIGPVAAAPWGSASILPISWMYIAMTGADGLTDATKYAILNANYISKRLENYFPTLYRSHGLVAHECILDLRAFKSVTAEDVAKRLMDYGFHAPTLSWPVAGTLMVEPTESESKYELDRFCDAMIAIHAEMTAVETGAVDAKNNLLKNAPHTADQIASDNWNRPYTREQAAFPAKSLLEYKFWPHVARVDNVFGDRNPVCSCVGMEAYQS*