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berkeley_reactor_200306_planktonic_scaffold_23420_141

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 181251..182159

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XJ57_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 57.5
  • Coverage: 301.0
  • Bit_score: 352
  • Evalue 2.30e-94
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEF60095.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.5
  • Coverage: 301.0
  • Bit_score: 352
  • Evalue 3.30e-94
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 35.4
  • Coverage: 294.0
  • Bit_score: 179
  • Evalue 1.00e-42

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 909
ATGGAACTGCGGCATTTGCGATACTTTCTGACTGTCGGCGAAACCTTGAACTTCACCAGGGCCGCCGCGAAGTTGCGCGTCGCCCAGCCGGCGTTAAGCCGGCAGGTGCAGGATTTGGAGGAGGAAATCGGCGTGGATTTGTTGAAGCGCAGTCCTCGTGGCGTGACGCTGACCGCTGAAGGCAAACTTTTTTTTGACGAGGCGCGCGACATCCTCAAGCGCTCCGAAGAGGCAATTTCCAAAACCCGCGCCCTGGCCCGCGGCGAATATGGCGAGCTGCACATCGGCTATGCCGCGTCGCCCACGGTGGAAATTTTACCGCCGGTGCTCGCGGCCTTTCAGAAAGCCGTGCCGCGGGTGAAAGTGATTTTGCACGATCTGGCCGGAGATGAAATCTACGAGGGACTTTGTAACGGATCGCTTGAACTGGCCGTGATGGTCAAGCCAACGGAAGAACAGTCGGCGGGCTTGCAGTTTGAACAGCTCCGCGGCTATCGCTTCTGGGTGGCCATGGCCAAAAGCCATCCCTTCACCCGGATGAAAAATATCACCGTCGCCAAAGTCGCTGCCGAACCGCTGGTTGCACTGCGCCGGCGTGATTTTTCCGGCTACCACGAATCCCTGGATCGGATTTTTTCACCGCAAAAGTTGAAACCGCGCCTCGTCGTGGAATGCGACAGCGCCAGCTCCCTGGTCACTGAAGTGGAAATCGGGCGCGGCATCGCCGTGGTGAATGAAGTTTTTCGACATTTTTCCGGCACGCGGCTGGCGCTGCGTCCGTTGTCCGACTCCACGGAATTTCATAGTGTTGGCATTGCCCGTGCCGCCAAAGGGGATGTGACTCCGGCTGGAGAAAAGTTTTGTGAGGTGCTACGGGCAGTCACCAAACAACTGACCCAGGCTAAATAA
PROTEIN sequence
Length: 303
MELRHLRYFLTVGETLNFTRAAAKLRVAQPALSRQVQDLEEEIGVDLLKRSPRGVTLTAEGKLFFDEARDILKRSEEAISKTRALARGEYGELHIGYAASPTVEILPPVLAAFQKAVPRVKVILHDLAGDEIYEGLCNGSLELAVMVKPTEEQSAGLQFEQLRGYRFWVAMAKSHPFTRMKNITVAKVAAEPLVALRRRDFSGYHESLDRIFSPQKLKPRLVVECDSASSLVTEVEIGRGIAVVNEVFRHFSGTRLALRPLSDSTEFHSVGIARAAKGDVTPAGEKFCEVLRAVTKQLTQAK*