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berkeley_reactor_200306_planktonic_scaffold_23420_140

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(180340..181107)

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Nodosilinea nodulosa RepID=UPI0002FB24B7 similarity UNIREF
DB: UNIREF100
  • Identity: 71.1
  • Coverage: 249.0
  • Bit_score: 355
  • Evalue 3.00e-95
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 68.0
  • Coverage: 250.0
  • Bit_score: 354
  • Evalue 2.50e-95
Oxidoreductase {ECO:0000313|EMBL:KIJ72967.1}; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.9
  • Coverage: 249.0
  • Bit_score: 354
  • Evalue 9.50e-95

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Taxonomy

Tolypothrix campylonemoides → Tolypothrix → Nostocales → Cyanobacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGAACAACAACAACACAAAAAAACTCGCCGGCAAAATCGCGCTCATCACGGGCGGCACCACCGGGCTCGGACTCGCCACGGCCAAGCGGTTCATCGAAGAAGGTGCGCATGTTTTCATCACCGGCAGACGGCAGGCAGAATTGGACAGTGCCGTGAAGAAACTGGGCGCGAACGTCACGGGCGTGCAAGGCGATGTGGCCAAGCCCGGAGATCTGGACCGCCTGTTCAGTGTCATCAAAAAGGAAAAAGGCCATCTCGATATCGTGTTCGCCAACGCCGGCATCGGTGCGTTTGCGCCGATTGGCGCGGTGACGGAAGAACACTTCGACAAGATTTTTGATGTGAATGTCAAAGGTCTTTTGTTCACGGTGCAAAAGGCGTTGCCGTTGTTGAAGGACGGCAGCTCCATCATCCTGAACGCCTCCAACGCCCAACAGCGCGGCACGGAAGCGTTCGGCGTCTATGCGGCGACCAAAGCCGCCGTGCGTTCCTTCGCGCGGACGTGGACAGCGGAATTGAAGAGCCGCAGTATCCGCGTCAATGCCATCAGCCCCGGCGTCGTGCCAACGGAGGGATACAGCGTTGGCCTCGGCCTCAGCGACGAGCAAATCCAGCAATTCGCCGCACAGATGGCGAAGCAGATTCCGCTCGGCCGCGTCGGTTCGCCCGATGAAATTGCCAAGGCCGTGCTGTTCCTCGCCAGTGATGACAGCAGCTTTGTCACCGGAACTGAACTGGTGGTGGACGGCGGGCAAACCCAGGTTTGA
PROTEIN sequence
Length: 256
MNNNNTKKLAGKIALITGGTTGLGLATAKRFIEEGAHVFITGRRQAELDSAVKKLGANVTGVQGDVAKPGDLDRLFSVIKKEKGHLDIVFANAGIGAFAPIGAVTEEHFDKIFDVNVKGLLFTVQKALPLLKDGSSIILNASNAQQRGTEAFGVYAATKAAVRSFARTWTAELKSRSIRVNAISPGVVPTEGYSVGLGLSDEQIQQFAAQMAKQIPLGRVGSPDEIAKAVLFLASDDSSFVTGTELVVDGGQTQV*