ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_148

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 190994..193663

Top 3 Functional Annotations

Value Algorithm Source
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 896.0
  • Bit_score: 1365
  • Evalue 0.0
DNA gyrase subunit A n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGG7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.9
  • Coverage: 896.0
  • Bit_score: 1365
  • Evalue 0.0
gyrA; DNA gyrase subunit A similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 879.0
  • Bit_score: 1039
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2670
ATGTCAGACGAAACTGAATCGAATCAAACTCCGCAGGCTCCGCAACCGCCGTCGCCGGCGGGCGGCGCCTATTCGCAGGGCGAAAAAATCGCCAAGATCAACGTCGCCGACGAGATCAAGAACTCGTTCCTCGATTACTCGATGTCCGTGATCATTTCGCGCGCGTTGCCGGACGTGCGCGATGGGCTCAAGCCGTCGCAGCGCCGCATTCTTTACGCGATGGAGAATTTGTCGCTGTTCCCGGGACGCAAGCACATCAAGTGCGCGAAAATCTGCGGTGACACCTCCGGCAATTATCATCCGCACGGCGAAGCGGTGATTTATCCCACGCTCGTGCACATGGCGCAGCCGTGGGCGATGCGCGAGAAACTCGTGGACGGCAAGGGCAATTTCGGGTCGGTGGAAAACGATCCGCCGGCGGCGATGCGTTACACCGAGGCGCGGCTGACGCATCTCGGCGCGTTGCTGATGTCCGACATGGAGAAGGACACGGTGGATTTCGTGCCGAACTATGACGAGCGCCTCACCGAGCCCACGGTGTTTCCCGCCGCGTTTCCCAATCTGCTGGTCAACGGCGGCACGGGCATTGCCGTCGGCATGGCGACCAACATGCCGCCGCACAATCTGGGCGAGGTGATTGACGGGATTTGTGCGCAGATTGACAAGCCGGACATCACGATTCCGGAATTGATGAAATTCGTCAAGGGGCCGGATTTTCCGACGGGCGGCATCATCTGCGGCATCGAAGGCATCCGGAATTATTTCACGACCGGCCGGGGCAGCATCAAGTTGCGCGGCCGGCTGGGCATTGAGGAATTGAAGGGCAACCGAGAACAAATCATCATCACAGAAATTCCATTCAACGTGAACCGGGCGGGGCTGGAGGAACAAATCGCAAATTTGGTCAACGAGAAGGTGATCACGGAAATTTCCGCGATGCGCAACGAGTCGGACGAAAACTGCCGACTCGTGATCGAACTCAAGCGCGACGCAGTGCCGAAGGTCGTCACAGCCAATCTGTTCAAGCACACGCAACTGGAGATTTCGTTCAGCGTGAATTCGCTGGCGATTGACCACGGCCGGCCGAAGACGCTCAATCTCAAGGAAATCATCCAATGCTACATCGAGCATCGCCGCGAGGTAATTTTGCGCCGCACGCGGTTTGAGTTGAAGAAAGCGGAGGAACGCGCCGAGTTGCTGGAAGGCTATCTCATCGCGCTGTCCAACCTCGACGAATTCATTCACATCATCCGGTCCAGCAAAACGCGGGACGAGGCGAAGATCAAGCTGCTGGCGTTTGAATGGAACCGCGCCCAAATCGAGCAGTGGGGCATTCTCATCCGGCAGGAAGCGCGGCTGCAGGCCGGTCGTTACGCGCTGACCGAGCGGCAGGTGGACGCGATTCTGGACCTGCGTTTGTATCAATTGACCGGGCTGGAAATTGACAAGGTGGATCGCGAATACAAGGCGCTGCTCGAAACCATCAAGGATTTGCTCGACATTTTGGCGAAGGAATCGCGGGTGATGGGCATCATCAAGCAGGAATTGAAGGAGATCAAAGACAAACACGCAACGCCACGCAAAACGGAGATTGCGCCGGACGAAGGCGAGATTGCCATTGAAGACCTGATTGCCAACGAAGGTGTCATCATCACGCTCACGCACGGCGGGTTGATCAAGCGCACGAATGTCAGCCAGTATCGCGCGCAACGCCGCGGCGGCAAAGGCGTCATCGGCATGACGACGCGCGAGGGCGAGACGGCGGAGGACAAGGATTTCGTGGAGCATTTGTTCACGGCGAGCACGCACGATTACCTGATGTTTTTCACGAACACCGGCCGCGTGTATGTGGAGCGCGTGCATGAGATTCCCGACATGGGCCGCGCCGCGAAAGGCCGCAGCATTGCGAATTTGCTGGAACTTCGGGCGGATGAAAAAATCGCCGCGCTCATCCGGATTCTTTCCAGAACGGATGAGAACCGGGAGGACGTAACCTGGAAACAGGCGGGGGAAATTTTCTTCGCCACGCAGCAAGGCACGGTGAAGAAGACTTCGCTCAACGAATTTGCCAATGTGCGCAAAGGCGGCATCATCGCCATCGGGATTGAGCCGGGCGACACGCTGATTGATGTGAAATTGACGCGGGGCAGCACGGGGGAAGGCGATCCGGGCGATGACGTGGTGTTGATCACCAAAAACGGCATGAGCATCCGGTTTCATGAAACCGATGTGCGTTCCATGGGCCGTTCCGCCACCGGCGTGCGCGGCATCAATCTGGAGGCGGGCGACGCGCTGGTGGCCGCCGCCATCGTGGTTCCGGACGCCGCGCTGCTCGTTGCCGGTGAAAACGGCATTGGCAAGCGCACGGTGTTTGACGAATACCGGGTGCAATCGCGCGGCGGCAAGGGCATTATCACCATGAAAACCGGCGACAAAACCGGCGGCGTGGTCGGGGCGCTGACGGTTCGTGACGCCGATGACATCATGCTCATCACGTATGGCGGCCAGATGGTGCGGACGAACGTCAGGGACATCCGCGAAGCGGGGCGCAACACGATGGGCGTGAAACTGGTGAATTTGGACGCAGGCGACAAGCTTCAAGCCATTGCGCCGGTGATTGGCGAGGATAAGGAAGAAACCGCCGCCGGGGAGGAGCCGGTTGCCGGCTGA
PROTEIN sequence
Length: 890
MSDETESNQTPQAPQPPSPAGGAYSQGEKIAKINVADEIKNSFLDYSMSVIISRALPDVRDGLKPSQRRILYAMENLSLFPGRKHIKCAKICGDTSGNYHPHGEAVIYPTLVHMAQPWAMREKLVDGKGNFGSVENDPPAAMRYTEARLTHLGALLMSDMEKDTVDFVPNYDERLTEPTVFPAAFPNLLVNGGTGIAVGMATNMPPHNLGEVIDGICAQIDKPDITIPELMKFVKGPDFPTGGIICGIEGIRNYFTTGRGSIKLRGRLGIEELKGNREQIIITEIPFNVNRAGLEEQIANLVNEKVITEISAMRNESDENCRLVIELKRDAVPKVVTANLFKHTQLEISFSVNSLAIDHGRPKTLNLKEIIQCYIEHRREVILRRTRFELKKAEERAELLEGYLIALSNLDEFIHIIRSSKTRDEAKIKLLAFEWNRAQIEQWGILIRQEARLQAGRYALTERQVDAILDLRLYQLTGLEIDKVDREYKALLETIKDLLDILAKESRVMGIIKQELKEIKDKHATPRKTEIAPDEGEIAIEDLIANEGVIITLTHGGLIKRTNVSQYRAQRRGGKGVIGMTTREGETAEDKDFVEHLFTASTHDYLMFFTNTGRVYVERVHEIPDMGRAAKGRSIANLLELRADEKIAALIRILSRTDENREDVTWKQAGEIFFATQQGTVKKTSLNEFANVRKGGIIAIGIEPGDTLIDVKLTRGSTGEGDPGDDVVLITKNGMSIRFHETDVRSMGRSATGVRGINLEAGDALVAAAIVVPDAALLVAGENGIGKRTVFDEYRVQSRGGKGIITMKTGDKTGGVVGALTVRDADDIMLITYGGQMVRTNVRDIREAGRNTMGVKLVNLDAGDKLQAIAPVIGEDKEETAAGEEPVAG*