ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_137

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 176368..177432

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate binding family 6 n=1 Tax=Clostridium papyrosolvens DSM 2782 RepID=F1TF24_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 60.3
  • Coverage: 335.0
  • Bit_score: 424
  • Evalue 9.60e-116
Uncharacterized protein {ECO:0000313|EMBL:KEZ21102.1}; Flags: Precursor;; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 371.0
  • Bit_score: 444
  • Evalue 1.30e-121
endoglucanase similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 328.0
  • Bit_score: 365
  • Evalue 1.50e-98

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium yanoikuyae → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
ATGCTGCCGATCACCTTCGCCATTTTGGCCGCTGTAAACTTTGGTCACGCCCAGGACCGCAAGCTGACCAAGAGTTTCATTGATTACTTTGCACCAATGCCCATCAACGGTTCATTAACCACGAATATATGGGGAGCGGCTATGGTCGGTCCGCGTGATCCCCAAAACGGCCTGGAAGACCCGACGATGAAACATTGGAATTATTGGGATGGCAAAATCCTCAAGGGGCCGGATGGCAAGTATCACATGTTTGCCAGCCGCTGGGAACAATCGCGCGGACATAATGGCTGGTTCCATTCCCGGGCTGTCGAAGCCGTGAGCGACAACCTGACCGGGCCGTATGTGGATGAGGGCCTGTGCTGGCCGGACAACGAAGGCGGCAAGGGACACAATGTGACTGCCTTGCAACTGCCCGACGGCCGCTACGCCGTGGTCATCAGCGAAACCCGGCCGGGCACGGTCTTTGTTTCCCAATCCATTGACGGTCCGTGGCAGGAGCTGGGAAAAATCAGCGTGGCCGGTGATCCGAAATGGCACGCGTCCAATGAAATCATCCTGTTGCGCCCCGATGGCCGGTTCGAGATGTTTGGCCGTCCCGGCGTGGTCATGATCAGCACCAACGGCGTGCTGGGTCCGTATGTGAAACAAGGCCCGGGCATTTATTCTAACATTGCCGGCCTGCCCAAGCATTCCTTGAATCATTTTGAAGATCCGACCCTCTGGTTCAGTGGCGGATGGTATCACATTGTCGTCAACAACTGGAGCGACCGCCGGGCTTATCATCTTACCTCGAAGGATGGCATTCACGACTGGACCTATCGCGGTGTGGCCTATGATCCGACAAAGGGTTTCCTTCGTTATACCAACGGCGCTGTGAATCATTGGTTCAAGCTCGAACGTCCCGGGGTTTACCTTGAAAAGGGGCACGTTGCCGCCGTCACTTTCGCTGTCATTGACGTGGCCAAGGGGGAGGAACATGGGAATGACGGTCACGGCAGCAAAGTCATTGTGGTTCCGTTTGATGGCGCGGCACTGGATCGGGATTTGCAAATGGAGTCAAAGTAA
PROTEIN sequence
Length: 355
MLPITFAILAAVNFGHAQDRKLTKSFIDYFAPMPINGSLTTNIWGAAMVGPRDPQNGLEDPTMKHWNYWDGKILKGPDGKYHMFASRWEQSRGHNGWFHSRAVEAVSDNLTGPYVDEGLCWPDNEGGKGHNVTALQLPDGRYAVVISETRPGTVFVSQSIDGPWQELGKISVAGDPKWHASNEIILLRPDGRFEMFGRPGVVMISTNGVLGPYVKQGPGIYSNIAGLPKHSLNHFEDPTLWFSGGWYHIVVNNWSDRRAYHLTSKDGIHDWTYRGVAYDPTKGFLRYTNGAVNHWFKLERPGVYLEKGHVAAVTFAVIDVAKGEEHGNDGHGSKVIVVPFDGAALDRDLQMESK*