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berkeley_reactor_200306_planktonic_scaffold_23420

Search features with annotation key words

Displaying items 331-345 of 345 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_23420_329
unknown

Not on your lists

373049..373636
DNA (588bp) protein (196aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_330
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

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373588..374154
DNA (567bp) protein (189aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003147B0F
sec-C metal-binding protein
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
berkeley_reactor_200306_planktonic_scaffold_23420_331
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

374737..375177
DNA (441bp) protein (147aa)
Response regulator receiver protein n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XDL2_9CHRO
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:AFZ30725.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
berkeley_reactor_200306_planktonic_scaffold_23420_332
unknown

Not on your lists

comp(375550..377922)
DNA (2373bp) protein (791aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_333
unknown

Not on your lists

comp(378545..380062)
DNA (1518bp) protein (506aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_334
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(380417..380773)
DNA (357bp) protein (119aa)
Transcriptional regulator, AraC family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBP0_9BACT
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEF62925.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
putative AraC family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_23420_335
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(380796..381743)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAV2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63137.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_23420_336
unknown

Not on your lists

comp(381766..383877)
DNA (2112bp) protein (704aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_337
unknown

Not on your lists

comp(383874..384326)
DNA (453bp) protein (151aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_338
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(384632..384952)
DNA (321bp) protein (107aa)
ferredoxin n=1 Tax=Acidovorax radicis RepID=UPI0002376E0E
4Fe-4S ferredoxin
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
berkeley_reactor_200306_planktonic_scaffold_23420_339
unknown

Not on your lists

385075..385251
DNA (177bp) protein (59aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_340
unknown

Not on your lists

386052..386501
DNA (450bp) protein (150aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_23420_341
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(386784..387512)
DNA (729bp) protein (243aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZWL0_OPITP
two component LuxR family transcriptional regulator
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACB73334.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_23420_342
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(387665..390115)
DNA (2451bp) protein (817aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002F24302
PAS domain S-box {ECO:0000313|EMBL:KCZ72125.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
multi-sensor hybrid histidine kinase
berkeley_reactor_200306_planktonic_scaffold_23420_343
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(390148..390285)
DNA (138bp) protein (46aa)
IS4 family transposase n=2 Tax=Proteobacteria RepID=K6CS20_PSEST
transposase, IS4 family
Uncharacterized protein {ECO:0000313|EMBL:EPD38756.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
Displaying items 331-345 of 345 in total

View Taxonomy