name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
berkeley_reactor_200306_planktonic_scaffold_23420_239
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(283730..286174)
|
Hpt sensor hybrid histidine kinase {ECO:0000313|EMBL:EEF57372.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EEF57372.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Hpt sensor hybrid histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS01_9BACT
multi-sensor hybrid histidine kinase
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_240
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
286305..287315
|
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:EEF57371.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EEF57371.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XS00_9BACT
dehydrogenase E1 component
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_241
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria
|
Not on your lists |
287412..288377
|
Transketolase central region n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ9_9BACT
transketolase
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_242
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
288421..289608
|
Catalytic domain of component of various dehydrogenase complexes n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRZ8_9BACT
Catalytic domain of component of various dehydrogenase complexes {ECO:0000313|EMBL:EEF57369.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
catalytic domain of components of various dehydrogenase complexes
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_243
uncultured planctomycete, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria
|
Not on your lists |
comp(289645..290085)
|
Hypothetical conserved protein n=1 Tax=uncultured planctomycete RepID=H5S891_9BACT
DoxX family protein
Hypothetical conserved protein {ECO:0000313|EMBL:BAL52377.1}; TaxID=120965 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured planctomycete.;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_244
GWA2_OP3_52_12_curated, Omnitrophica, Bacteria
|
Not on your lists |
comp(290192..290842)
|
Nitroreductase id=3714578 bin=GWA2_OP3_52_12 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
nitroreductase
Tax=GWA2_OP3_52_12_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_245
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
290935..291546
|
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM84_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF59077.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_246
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(291572..292459)
|
Lipoyl synthase {ECO:0000256|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoate synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Lipoic acid synthase {ECO:0000256|HAMAP-Rule:MF_00206}; Sulfur insertion protein LipA {ECO:0000256|HAMAP-Rule:MF_00206}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Lipoyl synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XM87_9BACT
lipoyl synthase
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_247
unknown
|
Not on your lists |
comp(292456..292560)
|
This feature has no annotations |
|
berkeley_reactor_200306_planktonic_scaffold_23420_248
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(292587..293375)
|
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Thiazole synthase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGJ6_9BACT
thiG; thiazole synthase
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_249
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria
|
Not on your lists |
comp(293499..295967)
|
DNA ligase (EC:6.5.1.2)
DNA ligase n=2 Tax=Ralstonia RepID=E2T282_9RALS
Tax=RifOxyA12_full_Lentisphaerae_48_11_curated
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_250
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria
|
Not on your lists |
comp(296165..299605)
|
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000362C675
Beta-galactosidase/beta-glucuronidase {ECO:0000313|EMBL:CDM64172.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_251
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
comp(299787..301325)
|
Uroporphyrin-III C-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN64_9BACT
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EEF58726.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
uroporphyrin-III C-methyltransferase
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_252
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
301621..302475
|
50S ribosomal protein L2 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM8_9BACT
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplB; 50S ribosomal protein L2
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_253
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
302481..302762
|
30S ribosomal protein S19 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM7_9BACT
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsS; ribosomal protein S19
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_254
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
302766..303098
|
50S ribosomal protein L22 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM6_9BACT
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L22
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_255
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
303105..303779
|
30S ribosomal protein S3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM5_9BACT
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S3
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_256
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
303808..304224
|
50S ribosomal protein L16 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM4_9BACT
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplP; 50S ribosomal protein L16
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_257
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
304231..304431
|
50S ribosomal protein L29 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM3_9BACT
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpmC; 50S ribosomal subunit protein L29
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_258
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
304438..304734
|
30S ribosomal protein S17 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM2_9BACT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S17
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_259
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
304745..305110
|
50S ribosomal protein L14 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM1_9BACT
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L14
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_260
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
305116..305352
|
50S ribosomal protein L24 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM0_9BACT
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplX; 50S ribosomal protein L24
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_261
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
305398..305940
|
50S ribosomal protein L5 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL9_9BACT
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rplE; 50S ribosomal protein L5
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_262
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
305949..306218
|
30S ribosomal protein S14 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL8_9BACT
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S14
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_263
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
306295..306681
|
30S ribosomal protein S8 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL7_9BACT
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
rpsH; 30S ribosomal protein S8
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_264
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
306688..307224
|
50S ribosomal protein L6 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL6_9BACT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L6
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_265
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
307270..307635
|
50S ribosomal protein L18 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL5_9BACT
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L18
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_266
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
307656..308330
|
30S ribosomal protein S5 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL4_9BACT
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
30S ribosomal protein S5
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_267
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
308345..308818
|
50S ribosomal protein L15 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL3_9BACT
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
50S ribosomal protein L15
|
|
berkeley_reactor_200306_planktonic_scaffold_23420_268
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria
|
Not on your lists |
308832..310223
|
Protein translocase subunit SecY n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL2_9BACT
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
secY; preprotein translocase subunit SecY
|