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berkeley_reactor_200306_planktonic_scaffold_23420_257

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 304231..304431

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L29 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 94
  • Evalue 4.30e-17
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 67.0
  • Bit_score: 94
  • Evalue 6.00e-17
rpmC; 50S ribosomal subunit protein L29 similarity KEGG
DB: KEGG
  • Identity: 50.8
  • Coverage: 65.0
  • Bit_score: 66
  • Evalue 2.10e-09

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 201
ATGAAATTTGCTGAAATCAAAGACATGACGCTGGTGGAGCTGGCGGCCAAGAGCCGCGACCTCCGGCATGAATTGTTCAACCTGCGCCTGCAGCAGGCCAGCGCCCAGCTCGAAAAACCCGCGCGCCTGCGCACGTTGCGCAAGGACATCGCGCGCGTCGAAACGCAAATCTCGGCCTTGCGCAACAAGGCGACCAAATAA
PROTEIN sequence
Length: 67
MKFAEIKDMTLVELAAKSRDLRHELFNLRLQQASAQLEKPARLRTLRKDIARVETQISALRNKATK*