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berkeley_reactor_200306_planktonic_scaffold_23420_261

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 305398..305940

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L5 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 75.4
  • Coverage: 179.0
  • Bit_score: 283
  • Evalue 1.00e-73
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 179.0
  • Bit_score: 283
  • Evalue 1.50e-73
rplE; 50S ribosomal protein L5 similarity KEGG
DB: KEGG
  • Identity: 60.5
  • Coverage: 177.0
  • Bit_score: 219
  • Evalue 4.00e-55

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAAGCCAGACTTTACAAAAAATATACGGACGAAGTGGTGCCCGCCCTGAAGGAAAAGCACAACTTTACGAATGTCCATCAGATCCCGAAGTTCGTTAAGATCGTGGTGAACATGGGCATCAGCGCCTCGCTGGAAAAAGGCGCGCTGGAAGATGCCGCCAAGGATCTGTCGCTGCTCACCGGCCGCAAGCCGGCGGTGAGCAAGTCGCGCAAGGCGATCGCAAACTTCAAGCTGCGCGAAGGCCAGCCGATTGGCTGCCGCGTGACGCTGCGGGGCGACACGATGTATGAGTTTTTTGACCGCCTGGTGGCCACCGCGCTGCCGCGGATTCGCGACTTCCGCGGGTTGTCGCCGCGTAAATTTGACGGGCGCGGCAACTACACCTTCGGCGTGGCGGACCAGACGATTTTTCCGGAAATCGAACTGGACAAGATCAAGCGCACGCAGGGCATGGACATCACGATTGTGACCACCGCGCCGAATGACGCGCAGGCACACGACCTGATGAAACTGATGGGCTTTCCGTTTGCGGAGAAATAA
PROTEIN sequence
Length: 181
MKARLYKKYTDEVVPALKEKHNFTNVHQIPKFVKIVVNMGISASLEKGALEDAAKDLSLLTGRKPAVSKSRKAIANFKLREGQPIGCRVTLRGDTMYEFFDRLVATALPRIRDFRGLSPRKFDGRGNYTFGVADQTIFPEIELDKIKRTQGMDITIVTTAPNDAQAHDLMKLMGFPFAEK*