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berkeley_reactor_200306_planktonic_scaffold_23420_255

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 303105..303779

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFM5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 81.7
  • Coverage: 224.0
  • Bit_score: 375
  • Evalue 1.90e-101
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 224.0
  • Bit_score: 375
  • Evalue 2.70e-101
30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 210.0
  • Bit_score: 288
  • Evalue 1.10e-75

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 675
ATGGGCCAGAAAACCAATCCCATCGGTTTGCGCGTCGCGGTCAACAAAGACTGGCGCTCGAAATGGTATGCCGACAAAAAGGAATTCGGCACCCTGCTGAACGAAGACCGCGAGATTCGCACTTTGTTAAAGAAGAAATTGGAGTCGGCCTCCGTGCCGCGGATTTTGATTGAGCGCGCGACGAACCGCTGCCGCGTGACGATCCTCACGGCCCGTCCCGGGGTGGTGATCGGCCGCAAAGGCTCGGAAATTGACAAGCTCAAGGAGGAGTTGAGCCGCAAGACCGGCAAGGAAGTCTATGTGGACATCGTTGAGGTCAAGCAGCCCGAGCTGGACGCGCAGTTGGTCGCGGAAAGCATCGCGTTGCAGTTGGAGCGGCGTGTTTCGTTCCGTCGCGCAATGAAAAAGGCGTTGCAAACGGCCAAGGACTTCGGTGCCGAAGGCATCAAGATTCGCGCGGCCGGCCGTCTGGGTGGCGCGGAACTGGCCCGCGTGGAAATGTATCACTGGGGCCGGGTGCCGTTGCACACGTTGCGCGCGAATATTGACTACGGCTTTGCGGAGGCAAAGACGGTTTATGGCAAGCTCGGCATCAAGTGCTGGATTTGCAAAGGGGACAACAAGCCGCAGAAGAAGGCCGAAAATAAACCCGAGGCGGCGCCTGTCGCCGGTTGA
PROTEIN sequence
Length: 225
MGQKTNPIGLRVAVNKDWRSKWYADKKEFGTLLNEDREIRTLLKKKLESASVPRILIERATNRCRVTILTARPGVVIGRKGSEIDKLKEELSRKTGKEVYVDIVEVKQPELDAQLVAESIALQLERRVSFRRAMKKALQTAKDFGAEGIKIRAAGRLGGAELARVEMYHWGRVPLHTLRANIDYGFAEAKTVYGKLGIKCWICKGDNKPQKKAENKPEAAPVAG*