ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_251

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(299787..301325)

Top 3 Functional Annotations

Value Algorithm Source
Uroporphyrin-III C-methyltransferase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XN64_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.2
  • Coverage: 507.0
  • Bit_score: 625
  • Evalue 4.10e-176
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EEF58726.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.2
  • Coverage: 507.0
  • Bit_score: 625
  • Evalue 5.80e-176
uroporphyrin-III C-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 46.8
  • Coverage: 509.0
  • Bit_score: 451
  • Evalue 3.00e-124

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1539
GTGCGGGTGAAATCATCCAAAGGGAAAGTTTACCTCGTTGGCGCCGGCCCCGGCGACGCCGGACTGCTCACACTGCGCGGCGCGGAACTGCTCCGGCAGGCCGATGTGGTTGTTTACGATGTGCTGGTGAATCCCGAGTTGCTGCGGCTCGCCCCGCCGGCCGCGGAAATCATCGGCCGCGGCAATCCCAAACGTCACGGCGGCCTTTCGCAGGAAGAACTCACCAGCCTCATCCTGACCCACGCCCGCTCCGGCAAAACCGTGGTGCGCCTCAAGGGCGGCGACCCGTTTGTTTTTGGGCGCGGCGGGGAGGAAGTGGAGGCGTTGGCGGCGGAAAAAATTCCCTTCGAGGTTGTCCCCGGCGTTTCCGCCATCACCGCCGTGCCAAATTATGCCGGCATTCCCCTCACCCACCGGGAACATTGCTCCAGTTTCACCGTCTTCACCGGCCACAGCGATTCGGCGGATGCCGCCACCGCGCTGCGCTACGAACAGATCGCCAAAATCCCCGGCACCAAGGTCGTGCTCATGGGCGTGGAGAATTTGCGGGACTGGACGCAATCGCTCATTGCGCACGGCCTGCCGCCAGAAACGCCCGTGGCGGTGATTCAATCCGGCACAACCGGAAAACAAAAATCCGCCGCCGGCACGCTGACCACCATCGCGCAACGTGTCGCGGAGAAAAAAATTGTGCCGCCCGCGCTGACCATTGTCGGCGAGGTCGTCACCTTGCGCGACCGGTTGAACTGGTTCGAAAACCTGCCGCTGTTCGGCCGGCGCGTCGTCGTCACCCGTTCGCGCGGCCAGATGGCGAAGTTCACCCAAAAACTCTCCCGGCTGGGCGCGGAAGTGCTGGAAATTCCCGCGATCAAAAGCACGGACCCGGAAAACCGCCAGGACGTGGTGGACGCCATGCTCGCGCTGAATTCCTACGACTGGCTGGTGTTCACCAGTGTCAACGGCGTGGCGTCCTTCTTTGAGTATTTTTTCCGCCACTTCCAAGACCTGCGCGATTTGGGCGGCGCCAAGATTGCCGCCGTCGGTCCGGCCACGGCCGCCCGGTTGCGCGAAATGCACTTGCAAGTGGATTTGATGCCGGAGGAATTTGTCGGCCGCAAAATCGCCGAAGCCTTCGCCAAGCACAGCAGCATTGAAAACACCAAAATCTGCCTGCTCCGCGCGCAAAACGCGAATCCCGATTTGCCCCGCGCCTTGGAAGAACTCGGCGGCATCGTGGACGACATCGGGCTTTACCGAACCGTTCAGGAAACCGAGGACTATTTTGGCGCGGCAGAAGACTTCCAGAAAGCCGGCGCCGACTGGATCACCTTTACCAGCGGCTCCACCGTGGAATTCTTCCATGCGCGGTTCGATTTGCCGAAGCTGATGAACCGATTCCCGCGATTGAAACTCGCATCCATCGGTCCCGAAACCAGCAAGGCCATCCGCGCCTTGCAACTGGAACCTGCCATCGAAGCCCGGGAACACACCACGGACGGTTTAATCGCGGCGCTGCTCAAGGCGACGAAGGCCGGGTAA
PROTEIN sequence
Length: 513
VRVKSSKGKVYLVGAGPGDAGLLTLRGAELLRQADVVVYDVLVNPELLRLAPPAAEIIGRGNPKRHGGLSQEELTSLILTHARSGKTVVRLKGGDPFVFGRGGEEVEALAAEKIPFEVVPGVSAITAVPNYAGIPLTHREHCSSFTVFTGHSDSADAATALRYEQIAKIPGTKVVLMGVENLRDWTQSLIAHGLPPETPVAVIQSGTTGKQKSAAGTLTTIAQRVAEKKIVPPALTIVGEVVTLRDRLNWFENLPLFGRRVVVTRSRGQMAKFTQKLSRLGAEVLEIPAIKSTDPENRQDVVDAMLALNSYDWLVFTSVNGVASFFEYFFRHFQDLRDLGGAKIAAVGPATAARLREMHLQVDLMPEEFVGRKIAEAFAKHSSIENTKICLLRAQNANPDLPRALEELGGIVDDIGLYRTVQETEDYFGAAEDFQKAGADWITFTSGSTVEFFHARFDLPKLMNRFPRLKLASIGPETSKAIRALQLEPAIEAREHTTDGLIAALLKATKAG*