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berkeley_reactor_200306_planktonic_scaffold_23420_268

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 308832..310223

Top 3 Functional Annotations

Value Algorithm Source
Protein translocase subunit SecY n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFL2_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 472.0
  • Bit_score: 624
  • Evalue 4.90e-176
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.5
  • Coverage: 472.0
  • Bit_score: 624
  • Evalue 6.80e-176
secY; preprotein translocase subunit SecY similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 470.0
  • Bit_score: 464
  • Evalue 3.10e-128

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1392
ATGTTTCGTTCCATCGCCAATACTCTCGCCAATTGTTTCAAAATTCCGGAGTTGAAATCCCGGATCTTGTTTACGCTCGGCATCTTGGCGGTCTGCCGGCTGCTCGCGGTCATTCGCATTCCCGGTCTGAACGGCCAGGCGTTGTCCGAATTTTTCTCCAAGCAGCAGGGCATGGGCGGTTTGCTCGGCATGTATAACACCTTTGCCGGCGGCGCCTTTGAACATTGCGCGATTGGTTCGCTGGGCATCATGCCCTACATCAGCGCCACCATCATCATTCAATTGTTGACTGCGGTGGTTCCGCGCCTCAGCAAGCTGGCGCGGGAAGAAGGCGGACGCACCAAGATTGTGCAATACGGGCGTTACCTGACGGTGTTGCTTTGTCTGGGGCAGGGCTTTTATTTCGCGAACAGCTGGTTGAATCCGCAAAAAGTATTTCAGGGATTTCAGGGGCAGTTGGTGATGATGGACAACCGCTTTGCATATTTCTTTGTGGCGGTCACGGTCATGACGGCCGGCACCATGTTGTTGATGTGGCTCGGCGAACAGATCACGGATCGCGGCATCGGCAACGGCGTTTCCTTGGTGATCACCATCGGCATTCTGGCCCGTCTGCCCAACGCGGTTCAAGGAGCCATTGACATGTTTTCCACCCACGGCGGAACCACGGAGCCGGCGCACAACCTGGTCACCACCGGCGTGGTGTTGGTGCTGCTGCTCCTGTTGGTGATCGCCGGGGTCATTGCCATCACCCAGGCGCAACGGAAGATTCCGGTGCAATACGCCCAACGCGCGGTTGGCCGCAAAATGTATGCGGGTGGAACCTCCTTCATGCCGTTGCGCGTGAATTATTCCGGGGTGATGCCGATCATTTTCGCGCAGTCCATCCTGATGTTCCCCAGCCCGGTGTTGCAGTGGCTGGCGAACAACATCAAGATGACGGAGCTGCACAACTTTTTCCTGGCCCTGGCGGTGCAGTTGAATTACGGGTCGTTTCTTTACCTGACGGTTTACGCGCTGATGATTTTGTTCTTCTCGTATTTCTGGGTGGCCACGCAGTTCAACGAAATCCAGATTGCGGATGATTTGAAGAAAAACGGCGGTTACATTCCCGGTGTTCGCCCGGGGCAGGGAACCAGCGACTATCTGCATAAGGCAATGAGCCGCATCACCCTGGCCGGTGCGATTTTCCTGACGATCATTGCCACGATTCCGATCATTTTGTCCCGGCGGATGAATGTGGATCAGAATGTGGCCCAGTTCTTTGGCGGCACGAGCATTTTGATCGCGGTCGGTGTGCTGCTCGACACGATGCGGCAGGTTGAGTCGCACTTGATGATGCGCCATTACGACGGATTCCTGAAGAAGGGTCGCGTGCGGGGCCGATTCTAA
PROTEIN sequence
Length: 464
MFRSIANTLANCFKIPELKSRILFTLGILAVCRLLAVIRIPGLNGQALSEFFSKQQGMGGLLGMYNTFAGGAFEHCAIGSLGIMPYISATIIIQLLTAVVPRLSKLAREEGGRTKIVQYGRYLTVLLCLGQGFYFANSWLNPQKVFQGFQGQLVMMDNRFAYFFVAVTVMTAGTMLLMWLGEQITDRGIGNGVSLVITIGILARLPNAVQGAIDMFSTHGGTTEPAHNLVTTGVVLVLLLLLVIAGVIAITQAQRKIPVQYAQRAVGRKMYAGGTSFMPLRVNYSGVMPIIFAQSILMFPSPVLQWLANNIKMTELHNFFLALAVQLNYGSFLYLTVYALMILFFSYFWVATQFNEIQIADDLKKNGGYIPGVRPGQGTSDYLHKAMSRITLAGAIFLTIIATIPIILSRRMNVDQNVAQFFGGTSILIAVGVLLDTMRQVESHLMMRHYDGFLKKGRVRGRF*