ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_155

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 198778..200016

Top 3 Functional Annotations

Value Algorithm Source
Histidine--tRNA ligase {ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|SAAS:SAAS00043629};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.2
  • Coverage: 415.0
  • Bit_score: 630
  • Evalue 1.10e-177
Histidyl-tRNA synthetase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XSG4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 415.0
  • Bit_score: 630
  • Evalue 7.90e-178
Histidyl-tRNA synthetase similarity KEGG
DB: KEGG
  • Identity: 50.7
  • Coverage: 400.0
  • Bit_score: 374
  • Evalue 2.20e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1239
ATGGAACGACTGCCTGGATTTAGAGATTTTTACCCCGAACCGCTGCCGCACAGCGATGTGTGGAGTGCCGATGCGCGCCAATATATTTTCGAAAAATGGCGCACCGCCGCCCGCCGTTACGGTTTCCGCGAATATGACGGACCGCCGCTGGAGCCGTTGGAATTGTTTACCACCAAAAGCGGTGAAGAAATAGTCGGGCAGCTTTACAATTTCAAGGACAAGGGCGACCGCGAAATTTCGCTGCGGCCGGAAATGACTCCCACCCTGGCCCGGATGGTGGCGGCGCGTGAACGGAATTACAAAAAACCCATCAAATGGTTCGCCATCCCGCAATTGTTCCGTTACGAACGCCAGCAAAAAGGGCGTTTGCGCGAGCATTTCCAGTTCAACGCGGACTTGATCGGCGAAACGGATCCGGCGGCGGATGCGGAATTGATTGCGCTGCTGATTGACACGCTGCGCGCGTTCGGGTTGACGGCGGAGGATTTCGTCATCCGCCTGAGCAGCCGCAATGCCTGGCAGGAATTTTTCCGGGCGGGCGGGGGGCATCACTCGCACGAATACGATTTCTTCCAGATCATTGACAAACTGGAGCGCACGCCGCCGGAAGAATCGGAAGCCAAATTGTCCGCGATGAATTTCTCGCTCGCGAAAGTCACGGAATTTATCAAGGCCGGCCGGCCCACGGCCGAACTGGAAACCATTCTGCAAAGCCTGGCCGCTCGCGGTCTGAAGGATTTCGTGAAGATTGATTACCAGGTGATTCGCGGTCTGGCGTATTACACCGGCGTGGTGTTTGAGGCGTTTGACCGCAAGGGCGAATTCCGCGCCATCGCCGGTGGCGGCCGCTACAACAACCTGGTAAAGCTGATCAGCGGCGGCAAGGTGGATCTGCCGGCGCTGGGCTTCGGCATGGGCGACGTGGTGCTGCTGGAACTGCTCAAGGAACGGGGATTGCTGCCGAAATTCGATTCGCCGATGGATGTGTTTGTGATGATTGAGGACGAAGGATTGCGTCCGCTTTCGTTGAAACTCGCGCATGATTTGCGCGCGGCGGGTTACGCGGTGGAGTATTCGCTTACGCCCGCCAAGCCCGACAAACAATTCAAGCGCGCGCAGGAACTGAAGGTGGCTTACACCGTCCGGCTGGAAAATGATGCCTACGTGCGCATCCGCAACAGCAAAACCCGCGAGGAAGTTGTCGCCGGCGTGACCGACGCCAAAAATCATCTGGGGTAA
PROTEIN sequence
Length: 413
MERLPGFRDFYPEPLPHSDVWSADARQYIFEKWRTAARRYGFREYDGPPLEPLELFTTKSGEEIVGQLYNFKDKGDREISLRPEMTPTLARMVAARERNYKKPIKWFAIPQLFRYERQQKGRLREHFQFNADLIGETDPAADAELIALLIDTLRAFGLTAEDFVIRLSSRNAWQEFFRAGGGHHSHEYDFFQIIDKLERTPPEESEAKLSAMNFSLAKVTEFIKAGRPTAELETILQSLAARGLKDFVKIDYQVIRGLAYYTGVVFEAFDRKGEFRAIAGGGRYNNLVKLISGGKVDLPALGFGMGDVVLLELLKERGLLPKFDSPMDVFVMIEDEGLRPLSLKLAHDLRAAGYAVEYSLTPAKPDKQFKRAQELKVAYTVRLENDAYVRIRNSKTREEVVAGVTDAKNHLG*