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berkeley_reactor_200306_planktonic_scaffold_23420_168

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 212544..213077

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XGN9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 160.0
  • Bit_score: 251
  • Evalue 3.30e-64
Transcriptional regulator {ECO:0000313|EMBL:EEF61090.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 160.0
  • Bit_score: 251
  • Evalue 4.60e-64
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 55.2
  • Coverage: 174.0
  • Bit_score: 207
  • Evalue 2.60e-51

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 534
ATGACACCGCTCAGTCCAGTTCAGCAGAAGTTCATCCTGCATTGGGGAGAAATGGGAACGAAATGGGGGATCAATCGCACGGTGGCCCAGGTCCATGCGTTGTTATTCATTTCGCCCAAGCCGCTGAACGCGGATGATCTGGTTGAGGCGCTGGGCGTGGCGCGGTCTAATGTCAGCACCAGCCTCAAGGAATTGCAGGGCTGGAGGATTGTGAAGCTGGTGCATATTCTGGGCGACAAGCGGGATCATTTTGAATCGCTCAAGGACGTTTGGGAATTGTTCCGCGTGGTGCTCAATGAGCGGAAGCGACGGGAAATTGATCCCACCATGCAGGTGCTCAACGAGTGCATTGCTGAAGCCGCAAAGGACAAGGCGACCGACGAATACACCGAAGCGCGATTGCGCGATCTGCGGAATTTCTTTGAAACCACTTCCGGCTGGTATGACCAGATTCGCCAGTGGCCGACCAGCACCCTCGTCAAATTTTTGAAGCTCGGTGACAAACTGGTGAAGCTGCTCGGCCTGGGAAGTTGA
PROTEIN sequence
Length: 178
MTPLSPVQQKFILHWGEMGTKWGINRTVAQVHALLFISPKPLNADDLVEALGVARSNVSTSLKELQGWRIVKLVHILGDKRDHFESLKDVWELFRVVLNERKRREIDPTMQVLNECIAEAAKDKATDEYTEARLRDLRNFFETTSGWYDQIRQWPTSTLVKFLKLGDKLVKLLGLGS*