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berkeley_reactor_200306_planktonic_scaffold_23420_172

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 215714..216580

Top 3 Functional Annotations

Value Algorithm Source
YqjF n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174644A similarity UNIREF
DB: UNIREF100
  • Identity: 55.2
  • Coverage: 259.0
  • Bit_score: 270
  • Evalue 1.90e-69
Uncharacterized protein {ECO:0000313|EMBL:EEF61087.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 258.0
  • Bit_score: 265
  • Evalue 6.50e-68

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 867
ATGAAGCAAACCCAACTGAACCAGTCCACCGTTGAATTAACGGCTGAACTCAGCCGGCTTGCCCGGCAACGCATGTTGTCAACGTGGGGCGAACCCCTGTTTGTTGCCGGCTGGAAGCGTGTGTTGATGATGCACTTTGAAGTGGATGCCGCCGCGCTTCAGCGGCAAGTGCCGTTCCCGCTCGATCTGCGCGATGGACGCGCGTTTGTGAGCTTGGTGGCCTTCACGATGTGCGACATGAAACCGCGTATCGGCGGGCGTCTGGCGGCCTGGTTGTTTCGACCGATTGCCACGCATGATTTTTTGAACGTGCGCACCTATGTCCGGCCCAACGGAGCGCGAGTTGTCCCAACTCGCAGCGGCTACGATTGCGACGACGAATCCGGCATTCATTTCCTCGCGGAATGGTTGTCCAACCGGCTGGCGGTAAAATTGGGGCCGACGACGTTCGGGTTGCCATATCATCACGGTCAGATTGCCTATCACCACAACTGGGAAGCCGGGGACATTCATGGTGAAGTTGTGGATTCAGACGGGCAGGGGAGGTTGCGCTATCACGCCGCAGTTCCCGCAGCAGCCAATTTTCAACCCTGCGAAGCCGGCTCGTTGACGGAGTGGTTGATGGAACGTTACACCGCGTTTAATTCTGCCGTCCCCTTCCGCCGCTTCTTCCGCGTCTGGCACCCGCCGTGGCCGCAGTGCCCGGGGTCGGTCGCGGTGGAAGACCAAACCTTGCTCACCCAACGCTGGCCGTGGTTTCGCGAAGCGCGTTTGATCGGCGCCAACTATTCAGACGGGTTTGATGAGGTCTGGATGGGGCGGCCGCACTGGGTGCTTACGGGCACCGCAAAGACACGAAGCCGATGA
PROTEIN sequence
Length: 289
MKQTQLNQSTVELTAELSRLARQRMLSTWGEPLFVAGWKRVLMMHFEVDAAALQRQVPFPLDLRDGRAFVSLVAFTMCDMKPRIGGRLAAWLFRPIATHDFLNVRTYVRPNGARVVPTRSGYDCDDESGIHFLAEWLSNRLAVKLGPTTFGLPYHHGQIAYHHNWEAGDIHGEVVDSDGQGRLRYHAAVPAAANFQPCEAGSLTEWLMERYTAFNSAVPFRRFFRVWHPPWPQCPGSVAVEDQTLLTQRWPWFREARLIGANYSDGFDEVWMGRPHWVLTGTAKTRSR*