ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_195

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 237881..240586

Top 3 Functional Annotations

Value Algorithm Source
Glycoside hydrolase family 2 sugar binding protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NWA4_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 880.0
  • Bit_score: 1049
  • Evalue 0.0
Glycoside hydrolase family 2 sugar binding protein {ECO:0000313|EMBL:AEU36616.1}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 880.0
  • Bit_score: 1049
  • Evalue 0.0
glycoside hydrolase family protein similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 880.0
  • Bit_score: 1049
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Granulicella mallensis → Granulicella → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 2706
ATGAACCACCACCCGGCGCAGCTTCGTCAACCTCCCATCCGCTCCGTTTGCTGGCGCGACGCGGATTTGGCCGGCCACAGCCTTTGGGTGATCGCGATGATTGCTTTCGCCTGGCTGGTTCCGGCCCTGTCGCCACTCCAGGCCGGGGAGGAACGGTTTTTGCCACCCGCCTCGCCGCACGCCGATTTCAACTTCAATCCGGGCTGGAAATTTTTCCGGGGCGATGCCACCAATGCCCGGCAGGTTGATTTCGACGATTCCAGATGGACCGCCGTGAGCGCGCCGCACACCTGGAATGACACCGATGCCTACGATGAACTCATCAGCCACGGCGGCGGCGAACGGCATGAATACACCGGCATCGGCTGGTATCGCAAACATTTCAAACTGCCCGCCGGCGCCCGGGGCGGAAAGGTTTTCCTGGAGTTCGAAGGCTTGAAACAAGCCGGGCGTTTCTGGGTGAACGGCCAGTATGCGGGGAAGTATGAAAATGGCGTGACGCCGTTTGGATTGGACCTGACCCCCTGGGTGAAGTTCGGTGACGCCGACAACGTCATCGCCGTGAAGGTGGACAACAGCGACACATACCGCGAAGCCGCCAGCGGCGTTGGTTACGAGTGGATGGGCCGCGCGTTTAATCCGAATTATGGCGGGTTAAACCATGACATCGTCCTCCATCTGACGGGCCGGATTTATCAAACGCTGCCGCTCTACGAAAATCTCAAGACGACGGGCGTTTATATCTATCCGACAAATTTTTCATTCGCCGGCAACAGTTGCGATGTCCACGTGCTTTCCCAGGTGCGGAATGAATCCGGCCAGGCGCAAACCATCACGCTGGAGGGAGTGGTGGCGGATGCCGGCGGTGAAGCATGCGCCCAATTTCAAGGCGATGCACTCCGTTTGACCAACGGCGAAACCCGGATTTTTGCGGCGCGCTGCCGGCTGACCGGCGCAAAATTCTGGAGCGACGCGTCCCCCAATCTTTACGACGTTTACACAATGTTGCGGGTGGCTGGAACCGTCGTTGACGTGCAAAAAATTCGCACCGGTTTTCGGCAGACCGCCTTCAAAGGTGGCGCGGGCACGGGCGGGGTTTATTTGAACAACCGGTTCGTCTGGCTCACCGGTTACGCGCAGCGTTCCAGCGACAGTTGGGCCGGGTTGGGCCAGGCGTATCCCGACTGGATGCATGATTACAATGCGGAGCTGATCCGCAGCACGCACGCCAATTACATTCGCTGGATGCACGTCGCGCCGCAGGCGGTGGATGTGCGCGCCTGCGACCGGGCGGGCATCATCGAAGTTTGCCCGGCGGGCGACAAGGAAGGCGACCCGGCGTTGGACAAGCGCCTGAAGCCGGCCGTGGCCGGCCGCCAGTGGGAGCAGCGGATGGAGGTTATGCGCGACACGATGATTTATTTTCGCAACCGGCCGAGCATTTTGTTCTGGGAGGCGGGCAACTCCGTGCTCACGCCGGAACACATGCGCCAGATGGTGGCGCTGCGCCAGAAATGGGATCCGCACGGCGGACGCGTGACCGGCTATCGCGGCAACAGCGACAATGCGGCCAATGCGGCGCTCACCCCGATCGCCGAATATTACGGCGTGATGATTGGCCAGGACCCGCACACCGACGCCTTGAAAGGCGACACGGACATGTTCCGCGCCTACAGTGCGCGGCGGCGTGACCGCGCGCCGTTGATTGAATGCGAGGATTTTCGCGACGAGGCGGCGCGCCGGTTCTGGGACGATTATTCGCCGCCGCATTTCGGTTTCAAGCCGGGGCCGGATGACACGTATCATTGGAACTCGGAAACGTTCTGCCTCGCGGCGGCCGTGCGGTATCACGATTATTTCCGCAACCTCATCACCAACACCGATCCGGCGCACGCGAAATGGTCCGCCTACGCGTCCATCTACTGGTCCGACGCGAACGCCGACGGACGGCAGGACAGCAGCGAAGTCGCGCGCGTCAGCGGCAAAGTGGACGCCGTGCGGCTGCCGAAACCGGCTTACTACGTTTATCGCGTGATGCAAAATCCCTTGCCCGATTTGCACCTCATCGGCCACTGGACGTATCCGACGAACACGGTGAAAACGGTTTATGTGGCGGCGAATCACTGCGATTCGGTGGAATTGTTCGTGAATGGGAAACCGGCCGGCCTCAGCCGGCAACCGTGCCGGTTCATTGATGATTTCGGCGGCCACCGCAAGGATCTCGGCGACACCGGCTACATTTACGCGTTTCCGGACGTTCACTTTGCGCCCGGCGAACTCCGGGCCGTTGGCCGTGTGAACGGGAAAGTGGTGGCGCGGGATGAAATTAAAACCGCCGGCGCACCGGAAAAATTGAAACTGACGGTTCATGCCGGTCCACAGGGGTTGCAGGCGGACGGTGCGGACGTGGCGTTCGTGGATGTGGAAGTCGTGGACGCAAACGGCGAACGCTGTCCCACGGATGAAAGCCGTGTGGATTTCACGCTCACCGGCCCGGCGGTCTGGCGCGGCGGTTACAACAGCGGCATTCCCCATTCCATCAACCAACTGCATCTCAATACCGAGTGCGGCATCAACCGCGTCGCAATCCGTTCAACACTCCAGCCCGGCGAAATTGTCCTGACGGCGACGCGCGACGACTTGAAGTCCGCGCAGGTGGAATTGGCATCCCGGCCGGTGAAGATCCTGGATGGCTTGATGGAGTAA
PROTEIN sequence
Length: 902
MNHHPAQLRQPPIRSVCWRDADLAGHSLWVIAMIAFAWLVPALSPLQAGEERFLPPASPHADFNFNPGWKFFRGDATNARQVDFDDSRWTAVSAPHTWNDTDAYDELISHGGGERHEYTGIGWYRKHFKLPAGARGGKVFLEFEGLKQAGRFWVNGQYAGKYENGVTPFGLDLTPWVKFGDADNVIAVKVDNSDTYREAASGVGYEWMGRAFNPNYGGLNHDIVLHLTGRIYQTLPLYENLKTTGVYIYPTNFSFAGNSCDVHVLSQVRNESGQAQTITLEGVVADAGGEACAQFQGDALRLTNGETRIFAARCRLTGAKFWSDASPNLYDVYTMLRVAGTVVDVQKIRTGFRQTAFKGGAGTGGVYLNNRFVWLTGYAQRSSDSWAGLGQAYPDWMHDYNAELIRSTHANYIRWMHVAPQAVDVRACDRAGIIEVCPAGDKEGDPALDKRLKPAVAGRQWEQRMEVMRDTMIYFRNRPSILFWEAGNSVLTPEHMRQMVALRQKWDPHGGRVTGYRGNSDNAANAALTPIAEYYGVMIGQDPHTDALKGDTDMFRAYSARRRDRAPLIECEDFRDEAARRFWDDYSPPHFGFKPGPDDTYHWNSETFCLAAAVRYHDYFRNLITNTDPAHAKWSAYASIYWSDANADGRQDSSEVARVSGKVDAVRLPKPAYYVYRVMQNPLPDLHLIGHWTYPTNTVKTVYVAANHCDSVELFVNGKPAGLSRQPCRFIDDFGGHRKDLGDTGYIYAFPDVHFAPGELRAVGRVNGKVVARDEIKTAGAPEKLKLTVHAGPQGLQADGADVAFVDVEVVDANGERCPTDESRVDFTLTGPAVWRGGYNSGIPHSINQLHLNTECGINRVAIRSTLQPGEIVLTATRDDLKSAQVELASRPVKILDGLME*