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berkeley_reactor_200306_planktonic_scaffold_23420_201

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(247040..248008)

Top 3 Functional Annotations

Value Algorithm Source
Cell wall hydrolase/autolysin n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XII1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 45.6
  • Coverage: 320.0
  • Bit_score: 259
  • Evalue 2.90e-66
Cell wall hydrolase/autolysin {ECO:0000313|EMBL:EEF60442.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.6
  • Coverage: 320.0
  • Bit_score: 259
  • Evalue 4.00e-66
cell wall hydrolase similarity KEGG
DB: KEGG
  • Identity: 37.2
  • Coverage: 301.0
  • Bit_score: 194
  • Evalue 4.20e-47

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 969
ATGAACGTGCGCAATTTTTTATTGCTGACGCTGATGCTGGCCGTTTCACCCGTGGTGCTGCCGGCGCAGGCAGCCTATATCAACGGCCATCATTACGTCGCCGTTACGGACTGGGCGGAGAAATACGGTTTTCATCCGGTTCACGACGGCAAACCGAATTCGGTGCTTTACCAAAAAAATGCCGCCACCGTGGAGTTTGTAAAAGATGCGCACACCGCCACCGTCAACGGCGTCAACGTGGTATTGTCCTTTCCCGTGGCCGTGGACAAAGGCACGTTTCTCGTCGCGGGCATGGATTTGGAAAAAACCGTGGATCCGCTTTTGTTCCCCTGGCGGGCGGATGACAATAAAATCAGGACCATCATCATTGATCCCGGTCACGGCGGAAAAGATCCCGGCAACATTTTCCGGGGCCATGACGAAAAAACCTACACGCTGCTGCTGGCGATTGACCTTTCGCGCGCGCTGCAGGCCGCCGGATTTAAAACCATCCTCACGCGCACAAAAGACACTTACGTTGACCTCGACGAACGGCCGGCGCTGGCCAACCGGCGCGGCGCCGATCTCTTTGTCAGCCTGCATTTCAATTCCTCGACCAGCCGCTCGGTGCAGGGCGCGGAGACGTATTGTATCACGCCGGTGGGCGCCAGTTCCAGCAATGCCGGCGGCCGGGGGGCAAACTATGGCCGCACCCCCGCCAACGCCTCCGAAACCGAAAGCTTGCTGCTGGCGTATGAGGTGCAAAAAGCCCTCGCAAAAAATCTCGGCGCCGGGGACCGCGGGGTTCGCCGGGCGCGATTCGCCGTGCTGCGCGACGCCAAAATGCCGGCGATCCTGGTGGAAAGCGGATTCATGTCCAATCCCGGCGAGGGCGCAAAAATCTTCACCCTGGCTTACCGCAAACAAATCGCCGCCGCCATCACCAAGGGAATCCTGGATTTCCAAAGACTGACCCGGCCCGGCAAGTAA
PROTEIN sequence
Length: 323
MNVRNFLLLTLMLAVSPVVLPAQAAYINGHHYVAVTDWAEKYGFHPVHDGKPNSVLYQKNAATVEFVKDAHTATVNGVNVVLSFPVAVDKGTFLVAGMDLEKTVDPLLFPWRADDNKIRTIIIDPGHGGKDPGNIFRGHDEKTYTLLLAIDLSRALQAAGFKTILTRTKDTYVDLDERPALANRRGADLFVSLHFNSSTSRSVQGAETYCITPVGASSSNAGGRGANYGRTPANASETESLLLAYEVQKALAKNLGAGDRGVRRARFAVLRDAKMPAILVESGFMSNPGEGAKIFTLAYRKQIAAAITKGILDFQRLTRPGK*