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berkeley_reactor_200306_planktonic_scaffold_23420_210

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 255098..256543

Top 3 Functional Annotations

Value Algorithm Source
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00041}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.5
  • Coverage: 485.0
  • Bit_score: 703
  • Evalue 1.20e-199
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16) similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 485.0
  • Bit_score: 479
  • Evalue 5.70e-133
Cysteine--tRNA ligase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNQ1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 485.0
  • Bit_score: 703
  • Evalue 8.60e-200

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1446
ATGGCTTTGCAACTGTTCAACACCCTGGCCCGCTCCGTGCAGGAATTCACGCCGCTCGATCCCGCCGGCAAAAACGTCGGCCTGTATTGCTGCGGTCCGACCGTTTATGACTTCGCGCACATCGGCAACTGGCGCACGTTTGTCTTCGCCGATCTCGTCCGCCGCACGCTCGAATTTTCCGGCTACCGCGTGAACCACGTCATGAACATCACCGACGTGGAGGACAAAATCATCAAGCGCGTGCGCGAACAGAACATCCCGCTGCGCGAATTCACCGGCAAATACGAGACGGCTTTTCTCGACGACCTGAAAGCGCTCGGCTGTCGCGAACCGCACCAGCGGCCGCGCGCCACCGAACACATTCCCGAAATCATCGCGCTCATCAAAAAACTCGTCGAACGCGGCGTCGCCTACCAGGCCGCCGACGGCTCGGTTTATTTTTCCATCGAAAAATACCGCGGCTGCGGCTGCCATTACGGCCAGTTGCTCAAATTGAACCTTGAAGAAATGCGCGCCGGCGAACGCGTCGCCTCCGACGAATACGAAAAGGAATCCCTCGCCGACTTCGCGCTCTGGAAAGCGCGCGTGCCGGAGGATGGCGATATTTTCTGGCCGAGCCCGTGGGGCGAAGGCCGCCCCGGCTGGCACATCGAATGTTCCGCCATGAGCCTCAAGGCGCTCGGCGAAACGTTCGACCTGCACCTCGGCGGCGAGGATTTGAAATTTCCGCATCACGAGGATGAAATCGCCCAGAGCGAAGGCGCCACCGGCAAACCCTTCGTGAAATACTGGCTGCACGGCGCGCACCTGCTCGTCGAAGGCAAAAAGATGAGCAAATCGCTCGGTAACTTTTTTACGCTCCGCGACCTGCTGGCGAAAGGGTTTACCGGTCGCGAAGTGCGCTATCTGCTGCTTGCCGCGCATTACCGGGAGACGTTCAATTTCACAATGGACGGTTTGCACGGCGCCAAAACCGCGTTGTCACGTATTGACGAATGCGTTGGCAAACTTCGCGAAACCGGAGCGCCGAACTCCCGTTCGGTGCAAAGCGAGACGCAAAACCCCGCCGGTCAGGAGACCGGCGCTCCGGCCCAGCTGCTGACCGGTTTTTCCGCCGCGCTCGCCGATGACCTCAACATAGCCGCCGCCTGGGCCGCGGTTTTCGACTGGGTGCGCGAAATGAACAAACGCCTGGCCGACAAGTCGCTTTCCGCCGGGGAAGCCGCCGCCGCGCTGGCCGCCTGGGAAAAAGTGGATTCCGTCCTCGGCATCGGCGTGAAAACTGAAACGGAAGTTCCCGCCGAAATCCAGTCGCTTGCCAACGATCGCGCGGCCGCCAAACAGGCAAAAGATTTCAAACGCGCCGATGCCATCCGCGACGAATTGAAAGCCAAAGGCTGGCTGATCGAAGACACACCCAAAGGGGCAAAGCTGAAACCGATTTAA
PROTEIN sequence
Length: 482
MALQLFNTLARSVQEFTPLDPAGKNVGLYCCGPTVYDFAHIGNWRTFVFADLVRRTLEFSGYRVNHVMNITDVEDKIIKRVREQNIPLREFTGKYETAFLDDLKALGCREPHQRPRATEHIPEIIALIKKLVERGVAYQAADGSVYFSIEKYRGCGCHYGQLLKLNLEEMRAGERVASDEYEKESLADFALWKARVPEDGDIFWPSPWGEGRPGWHIECSAMSLKALGETFDLHLGGEDLKFPHHEDEIAQSEGATGKPFVKYWLHGAHLLVEGKKMSKSLGNFFTLRDLLAKGFTGREVRYLLLAAHYRETFNFTMDGLHGAKTALSRIDECVGKLRETGAPNSRSVQSETQNPAGQETGAPAQLLTGFSAALADDLNIAAAWAAVFDWVREMNKRLADKSLSAGEAAAALAAWEKVDSVLGIGVKTETEVPAEIQSLANDRAAAKQAKDFKRADAIRDELKAKGWLIEDTPKGAKLKPI*