ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_23420_220

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(264415..266241)

Top 3 Functional Annotations

Value Algorithm Source
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.4
  • Coverage: 613.0
  • Bit_score: 783
  • Evalue 1.50e-223
DNA primase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFW4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.4
  • Coverage: 613.0
  • Bit_score: 783
  • Evalue 1.10e-223
DNA primase similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 598.0
  • Bit_score: 352
  • Evalue 1.70e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1827
ATGGCCGGTTTTCTCTCCCCCACCACCCGCGAACAAATCCGCGCCGCCAGCGACATCGTGGATGTCATCGGCTCGTATATTCCGCTGAAACGCGCGGGCGCAAACTGGACCGCGCTCTGCCCGTTTCACAAGGAAAAGTCGCCCAGCTTCAACGTCAATCCGCAGCGGCAGATTTTCCATTGCTTCGGCTGCCACAAAGGCGGCGACGTGTTCACGTTCGTCAAGGAATACGAAAACATCGGTTTCATGGACGCCGTGCGGCGGCTGGCCGAACGCGCCAAGATTCCGCTGGAATTTGACAGCTCGCCCGGCGAACAGCAGTCGCGCCACCTCAAGGATCAGTTGCTCGACATTCACGAGCAACTCACGCAACGCTGGCAAAACTGCCTCGCCAGCGAAGCTGCCGGGCAGCGCGCCCGCGATTACCTGGCCAGTCGCGGCGTTTCCGCCGACGCCATCAAACTCTTTCGTCTCGGCGCCGCGCCGGAATCCTGGGACGACACGGTCAATTGGGCCAGGACCAAAAATTTTCCGCTCGAAGTCGTTGAGCAAGCCGGGCTCATCATCAAAAAAGAGGAAACCGGGCGCTATTACGATCGCTTTCGCGGGCGGCTGATGTTTCCGATCGGCAACGAACAGGGCCGTGTCGTCGCTTTCAGCGGCCGCGTTTTGCCCGGCGACGACAGCCCGGCCAAATACGTCAACTCGCCGGAAACACCCATCTTCACCAAGAGCAAAATTTTCTTCGGCCTCGACAAATCCAAACGCGCGATTCTCGACGCCGGTTACGCCGTTATCTGCGAAGGCCAGTTGGATTTGATCGCCTGTTACCTGGGCGGCGTGCAAAACATTGTCGCCCCGCAGGGCACGGCCTTTACCGAACAGCACGCGCGGATTTTGAAACGCTACGCGAACGAAGTCGTGCTGTGCTTCGACTCGGACAACGCCGGCCAAAACGCCATCGTCCGCGCGCTGGATCATCTGCTGGCGGCCGAGCTGACCGTGCGCGTGGCCGTCGTGCCTTCGCCACACGACCCGGACAGTTTCATCAAGGCCAATGGCGGCCCGGCCTTCAAGGAACTCGTCGAACGCGCGGAAGGATTTTTCGATTACCTGCTGAAACGCCTGTGCGCCACCAACGACCTGGCCGGCGACAAGGGGCGGCTGGCCGTTTTGCGCGGCATGGGCGAGGCACTGCAAAAAACCCGCAACTCCGTCCTGCTCGACACGCACGCGCAAAAAACCGCGTTGCGACTCGGCGTGGCCGTGGATGCGGTGCGCAAGGAGTTTGCCAAGATCAAACCGCCGGGCACCGCTCCCCGCGCGGAGGACGGCCCGGATGATTCGGTTCTGGCCGGGGAAGCGGAAGCAGAAACGGAAACGGCGGTCCGGCCCTCACCGCTTGAACTTCACCTGCTGAAACTACTGTTTCTGCACGAGGAATTGGCACCCTGGCTGACCGCCCATTTGGACATCCACTGGCTGGCGCATCCGCTGGTGCGGCAAATCGTGGATGCCCGTTTTGCCACGATCGAGCATGAAACCTGGCACAATCTGGCGGAGTTTCTCGACACCTGCGAATCCGCCGAAGCGCGAAGCCTCATCACCGAAGCCGTCGCGGATGAACGCCAGATGCCGAATCCCGAAATCCAGTTCGCCGATGTCGCCCTCAAGCTGAGAAACCAGTTTCTGGACCAGCAGATCGCCGCGTTGACGCAGCAGCTCAGTTCATCGGAAATGGACGAGGTGATGAAACTTGAATTATTGCAGCAGCAACAGGCGTTGAAAGCGCGGAAACGTTCCGCGCTCGCGCCTTTGGTGAATTAA
PROTEIN sequence
Length: 609
MAGFLSPTTREQIRAASDIVDVIGSYIPLKRAGANWTALCPFHKEKSPSFNVNPQRQIFHCFGCHKGGDVFTFVKEYENIGFMDAVRRLAERAKIPLEFDSSPGEQQSRHLKDQLLDIHEQLTQRWQNCLASEAAGQRARDYLASRGVSADAIKLFRLGAAPESWDDTVNWARTKNFPLEVVEQAGLIIKKEETGRYYDRFRGRLMFPIGNEQGRVVAFSGRVLPGDDSPAKYVNSPETPIFTKSKIFFGLDKSKRAILDAGYAVICEGQLDLIACYLGGVQNIVAPQGTAFTEQHARILKRYANEVVLCFDSDNAGQNAIVRALDHLLAAELTVRVAVVPSPHDPDSFIKANGGPAFKELVERAEGFFDYLLKRLCATNDLAGDKGRLAVLRGMGEALQKTRNSVLLDTHAQKTALRLGVAVDAVRKEFAKIKPPGTAPRAEDGPDDSVLAGEAEAETETAVRPSPLELHLLKLLFLHEELAPWLTAHLDIHWLAHPLVRQIVDARFATIEHETWHNLAEFLDTCESAEARSLITEAVADERQMPNPEIQFADVALKLRNQFLDQQIAALTQQLSSSEMDEVMKLELLQQQQALKARKRSALAPLVN*