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berkeley_reactor_200306_planktonic_scaffold_23420_222

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(266982..268742)

Top 3 Functional Annotations

Value Algorithm Source
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFW6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 607.0
  • Bit_score: 387
  • Evalue 2.20e-104
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:EEF61128.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 607.0
  • Bit_score: 387
  • Evalue 3.00e-104
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 31.7
  • Coverage: 227.0
  • Bit_score: 93
  • Evalue 1.80e-16

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1761
ATGGTGTCGGTGCTGGTTTGCGGCTGCTCACCCACCGGGCCCGGCGCGCTTCTCAAAGGCAAGAAAATGCTGGACCGGGGCGACTACGCGGGGGCCGTGGCGGAGTTGCGCACCGCCACCGCGCTGCTGGCCACCAACGCGGCGGCGTGGAATTACTACGGGGTCGCCCTGCAGGGCGCCGGCCAGCCAACCGAAGCCATGAACGCCTACCAGCACGCGCTGCAACTGGATCGCGACCTGATCGAAGCGCGGTTGAACCTCGGCACGGTGTTCCTGCAACAAAACAAGCCGGGCGACGCCAGGACGGAGTTCACCGCCTACACGTTGCGGCGGCCCAACGATCCGGAAGGCTGGCTGAAACTGGGGTCCGCCCAGTTGCGGCTGGAACAGACCATCGCGGCCGAACGCAGTTTCAGCGCCGTGCTGGCGTTGAAAACGAACGAGGCGGAAGCCTACAACGGCCTGGGCCTGGCCCGCGTCCAGCGCAAGAAGCCCGGCGAAGCCGCGCAGTTCTTCGCCGCCGCCGTGCGTTTGAATCCGCATTATGCCGCCGCGCTGCTGAATCTGGCCACCGTGTATGATCAGTATTTGAACAATGACAAGGCGGCGCTGGAATGTTACCGGGCCTATCTGGCGCTCGAACCCCGGCCGGCCAACTGGGATGAAGTCAACGCGCTGGTGAATAATCTCGAACAATCCCTTTCGCTCGGCAAAACAACGTCCGCCGCGCCACCAGCCACTGTGCCGCCCCCGATCGTCACGCCGAACCAGCAATCCCCGCCGGCCACCACCGTTGCCGAAGCAAGGCCGCAGCCACTCTCGCAACCGCCAGCGCGGCCACCATCGAAGCCACAACCCCAGCCAGTCCAGGACCGAATTCTTCAATCGCCGCGCGCCCAGGCCAATGCACCGGCAAAATCCCCCGCCCCGGCGCAGCCTTCCCGGACGGAACCCGCCGCCGCCCCGCGAGAAGTCGTTCAAGTGGCGCCGGAGCCGCAGATAGTCGCCCACCCCGCCGCTCCCATCGCCACGGCCCGGCCGGCAACCCCCGTTTTCGAAGCCCAGCGCACGGCTTCGGCAAGTTCCGCGCCAGCGCATCAACCGGCCGAAAATTCCGGGCTGGCCTATTCCAAAACCGGCGTCACGCCGCTGCCGAACACGCCCGCAGACATGACCGTCCAAGCGGCCGCCGCGCAGCCGGCCCGGCCGAAGCCGGTTGTCATCGTGCCGCCCGCGCCGGTGAATTTCCCCAGTTACAATTATCGTTCGCCCGGCCGGCCACGAACCGGAGATCGGCGGGCGGCGGGCGGCGCCTTTACCCAGGCGCGCGAGGCGGAACAAATGGAACAATGGACCGTGGCTCTGAACGATTACCGCACAGCGGCCCGGCTCGATCCTTCGTGGTTTGAAGCGCAATACAATGCCGGCGTCATCGCGCAGCGGCTCCAAAATTATTCCACCGCCCTGGCCAGCTATGAGATGGCGCTGGCGATCCAGCCGGATTCGGTGAATGCCCGCTACAATTTCGCCCTGGCCTTGAATGCGGCCGGCTATGTGCCGGACGCCGCCAGGGAACTGAAAAAAATCCTGGCGGCTCATCCGGGGGAGGTGCGGGCGCACCTCGCGCTGGCCAATATTTGCGCGCAATCGCTGCACGATCCCGCCCAGGCGCGGCAGCATTATCTGAAAGTGCTGGAGCTGGACCCGGACAACCCGCGCACCGCCGAAATCCGTTTCTGGCTGGCGGCCAATCCCGGTTGA
PROTEIN sequence
Length: 587
MVSVLVCGCSPTGPGALLKGKKMLDRGDYAGAVAELRTATALLATNAAAWNYYGVALQGAGQPTEAMNAYQHALQLDRDLIEARLNLGTVFLQQNKPGDARTEFTAYTLRRPNDPEGWLKLGSAQLRLEQTIAAERSFSAVLALKTNEAEAYNGLGLARVQRKKPGEAAQFFAAAVRLNPHYAAALLNLATVYDQYLNNDKAALECYRAYLALEPRPANWDEVNALVNNLEQSLSLGKTTSAAPPATVPPPIVTPNQQSPPATTVAEARPQPLSQPPARPPSKPQPQPVQDRILQSPRAQANAPAKSPAPAQPSRTEPAAAPREVVQVAPEPQIVAHPAAPIATARPATPVFEAQRTASASSAPAHQPAENSGLAYSKTGVTPLPNTPADMTVQAAAAQPARPKPVVIVPPAPVNFPSYNYRSPGRPRTGDRRAAGGAFTQAREAEQMEQWTVALNDYRTAARLDPSWFEAQYNAGVIAQRLQNYSTALASYEMALAIQPDSVNARYNFALALNAAGYVPDAARELKKILAAHPGEVRAHLALANICAQSLHDPAQARQHYLKVLELDPDNPRTAEIRFWLAANPG*