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berkeley_reactor_200306_planktonic_scaffold_23420_323

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(367223..368119)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI0003686629 similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 298.0
  • Bit_score: 360
  • Evalue 1.10e-96
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.7
  • Coverage: 295.0
  • Bit_score: 353
  • Evalue 3.80e-95
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACB74725.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 295.0
  • Bit_score: 353
  • Evalue 1.90e-94

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Taxonomy

Opitutus terrae → Opitutus → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 897
ATGGAATGGTTGAATTATCATCATCTGCGATACTTTTGGACGGTGGCGAAAGAAGGCAGTTTACGTAAAGCCTCGGAAAAACTGCACGTGTCGCAACCGTCCATGTCGGCCCAAATTCAGGCGCTTCAACAATCGCTGGGAGAAAATCTATTTCGCCGCAGTGGACGCTCGTTGGTGCTGACTGAAATGGGCCGGGTGGTGTATGGCTACGCAGACGAAATTTTTTCGTTGGGACAAGAATTGGTGAGCACGGTGAAGGGGCATTTGGTCAACCCCGTGGTCAAGTTCAACGTGGGCATTGCGGACTCGGTCCCGAAACTGGTTGCCAAGGAAATTCTTAAACCGGCATTTTCTCATGATCCACCGGTGCATGTGATCTGCCATGAAGGCAAGGTGGATGATTTGCTGGCGCAACTGGCGACACTGCGCCTGGACATAGTTCTGGCCGATGAACCGGCTTCAACCAGCCTGAAGTTCAGGACATTTAATCACCTGTTGGGTGAGTGTGGAGTGACCTTTTGTGCTGCTGGTTCACTGGCAAAGAAATTGCGCAAAAACTTTCCGAAATCGCTGGATGGCGCTCCGGCATTGTTGCCAACGCAAAATTCCAGTATGCGAAGGGCGTTGGAGAAGTGGTTCCAGACCATCAATGTCCGCCCTCATGCCATCGGTGAATTTGAGGACGCGGCCTTGATGACGGTTGTGGCGACAGAAGGATTGGGTTTCATGCCAATGGCGGCGGTGGTCAAAAAGGAATTGTCCCGTTACAAGCTTGAAATCATTGGCACGACAGAAAAATGCACCAATCATTTTTATGCGATCAGCGGCGAACGGCGTTTGACGCATCCGGCAGTGGTAATGATTACGGAAAGTGCGCAAAGACGAATGTTCCGGTAA
PROTEIN sequence
Length: 299
MEWLNYHHLRYFWTVAKEGSLRKASEKLHVSQPSMSAQIQALQQSLGENLFRRSGRSLVLTEMGRVVYGYADEIFSLGQELVSTVKGHLVNPVVKFNVGIADSVPKLVAKEILKPAFSHDPPVHVICHEGKVDDLLAQLATLRLDIVLADEPASTSLKFRTFNHLLGECGVTFCAAGSLAKKLRKNFPKSLDGAPALLPTQNSSMRRALEKWFQTINVRPHAIGEFEDAALMTVVATEGLGFMPMAAVVKKELSRYKLEIIGTTEKCTNHFYAISGERRLTHPAVVMITESAQRRMFR*