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berkeley_reactor_200306_planktonic_scaffold_37596_48

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 59826..61070

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2II14_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 398.0
  • Bit_score: 510
  • Evalue 1.60e-141
Arabinose efflux permease family protein {ECO:0000313|EMBL:EIF30366.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 398.0
  • Bit_score: 510
  • Evalue 2.20e-141
major facilitator superfamily multidrug (fosmidomycin) efflux transporter similarity KEGG
DB: KEGG
  • Identity: 62.2
  • Coverage: 399.0
  • Bit_score: 509
  • Evalue 5.80e-142

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Taxonomy

Burkholderia sp. Ch1-1 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1245
ATGATAACCCAGACCAAAACCACGATGGCCCCAACCACGGTCCGAGCGTCCACCTCGGTCATGGCCATCCTGTTTGCGCTCAGTTTTTCGCATCTGCTGAACGATGCCATCCAGGCCCTCATCCCGGCCATTTATCCGCTGTTGAAAGAATCCTACGCCCTGAATTTCACGCAGATCGGGTTGATCACGCTGACCTTTCAGATGGTGGGATCCGTGTTTCAACCGGTCGTCGGCCTTTACACCGACCGTCATCCCAAACCCTACTCGCTCGTCGCGGGCATGGCGCTCACATTAAGCGGATTGGTTTTGCTGGCGCTGGCGCCGTCGTATCACGTCGTCATTCTGGCGGCGGGAATGGTCGGCCTGGGCTCGGCCATTTTTCATCCGGAGTCCTCGCGCATGGCGCGCCTGGCTTCCGGCGGACGCCACGGCTTCGCGCAGTCGTTGTTCCAGGTGGGCGGCAACTTCGGCACCGCCATGGGACCGTTGCTGGCCGCGTGGATTGTCGTTCCGCACGGACAACACTTCCTCCTGGTGTTCGCGGTGCTGCCGTTTTTCGGAATGTTCATCCTCACCCGGGTCGGCAACTGGTATGCGCAAAAACTCGCGGCAACGCACGCCCGGCACGGTTCCGCCGCGCCGCAGCATCACCTCGCCGCTTCGCGCGGAAAAATCATCTTTTTCCTCGCGGTGCTGTTGACGCTCATGTTTTCCAAGTTCTTTTACCTGGCGTCCATGACGAATTATTACACATTTTATTTGATCAAGAAATTCGGCCTGCCGGTGACCAGTTCGCAGCTGTATTTGTTTCTGTTCCTCGCCGCCGTCGCGGCGGGCACGATCATCGGCGGACCGGTGGGCGACCGCATCGGACGCAAACAGGTCATCTGGATTTCCATCCTCGGCATGGCGCCGTTCGCGTTGCTGCTGCCGTTCGCCAATCTGTTTTGGACCGCCGTGCTGTCTCTCATCATCGGCCTCATCATGGCGTCCGCATTTCCCGCGATCCTGGTTTATGCGACGGAACTCCTGCCCGGCAAGGTGGGCACCATCGCGGGACTTTTTTTTGGTTTCGCGTTTGGGATGGCGGGAATTGCTTCGGCGGTTCTGGGAAAACTCGCCGATGCCACCAGTATCCTCTTTGTGATGAAGGTGTGCTCCTTCCTGCCATTGATCGGATTGCTGACCGGGCTGTTGCCAAACCTCAAGGATCATGAACACGGGATCGAAAAACGTCAAAAATGA
PROTEIN sequence
Length: 415
MITQTKTTMAPTTVRASTSVMAILFALSFSHLLNDAIQALIPAIYPLLKESYALNFTQIGLITLTFQMVGSVFQPVVGLYTDRHPKPYSLVAGMALTLSGLVLLALAPSYHVVILAAGMVGLGSAIFHPESSRMARLASGGRHGFAQSLFQVGGNFGTAMGPLLAAWIVVPHGQHFLLVFAVLPFFGMFILTRVGNWYAQKLAATHARHGSAAPQHHLAASRGKIIFFLAVLLTLMFSKFFYLASMTNYYTFYLIKKFGLPVTSSQLYLFLFLAAVAAGTIIGGPVGDRIGRKQVIWISILGMAPFALLLPFANLFWTAVLSLIIGLIMASAFPAILVYATELLPGKVGTIAGLFFGFAFGMAGIASAVLGKLADATSILFVMKVCSFLPLIGLLTGLLPNLKDHEHGIEKRQK*