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berkeley_reactor_200306_planktonic_scaffold_37596_51

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(63407..63910)

Top 3 Functional Annotations

Value Algorithm Source
N utilization substance protein B homolog n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNZ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 167.0
  • Bit_score: 258
  • Evalue 4.30e-66
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.9
  • Coverage: 167.0
  • Bit_score: 258
  • Evalue 6.10e-66
antitermination protein NusB similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 166.0
  • Bit_score: 129
  • Evalue 6.60e-28

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 504
ATGGGCAAACGACGCGAAGCGCGCGAGCGCGCAGTCCAATTTTTATTTCAGCACGACCTGAACCCGCCGGACAACCTGGAGCTGGAGCTGGCGCAGTTCTGGAATTCCCAGCGCGCCGCCGCCATTGAAGAGGAGAAGAAGGGCAAGGCCACGTGGGGCGAAAAAAACGAGCTGCCGCCGCCCACCGTTGAGGAGGCTGAAACGCGGCTGTTTGCCGAACCGCTCATCAAGGGCGTGCTGGAACATCGCGACGCGATTGATGAACGCATCAAACAGCATTGCAAGAACTGGGATTTCAACCGCATCGCCGCCGTGGACCGCAACATCATGCGGCTCGCCATTTACGAAATGTTGCATCGTGAAGACATTCCGCCGGTCGTGAGTATCAACGAGGCGGTGGACATCGCCAAAAAATTTTCCACCCAGGACAGCGGCAAGTTTGTGAACGGCATTCTCGACAAGGTGCGCGGCGAAATTTTGCGTCCGGCCCGGACGGTGAAATAA
PROTEIN sequence
Length: 168
MGKRREARERAVQFLFQHDLNPPDNLELELAQFWNSQRAAAIEEEKKGKATWGEKNELPPPTVEEAETRLFAEPLIKGVLEHRDAIDERIKQHCKNWDFNRIAAVDRNIMRLAIYEMLHREDIPPVVSINEAVDIAKKFSTQDSGKFVNGILDKVRGEILRPARTVK*