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berkeley_reactor_200306_planktonic_scaffold_37596_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 65097..66239

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XMU6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 63.5
  • Coverage: 384.0
  • Bit_score: 466
  • Evalue 1.40e-128
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF58871.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 384.0
  • Bit_score: 466
  • Evalue 2.00e-128
membrane protein similarity KEGG
DB: KEGG
  • Identity: 51.7
  • Coverage: 391.0
  • Bit_score: 379
  • Evalue 6.30e-103

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1143
ATGAAACCCAATCTCAAGCACACCCTTTTTGTCGCCATTTTCCTGGGCCTCGCCGCCGGATTTTCCGCGGGCTGCAGCCGCGCGGGCGCGCAACCCCAAACCCCGCCGCCGCCGGCGGTGACCGTCGCTCCAGTCGAGCAGAAGGAAATCGTCGAGTGGAGTGAATTCACCGGCCACACCGAACCGGTGGACGCGGTCGAAGTGCGCCCGCGCGTTTCCGGTTACATTCAGGAAGTCAAATTCCACTCCGGCCAGCTCGTGAAGAAAGGCGACGTGTTGTTCGTCATTGATCCGCGCTGGAACCAGGCGGTTTACGACCAACGCAAGGCGGAATACGAACAGGCCCGGCGCGAGGAGGCGCGCACGGAACAACTGCTGGCCAACAAGGCGATTTCGCAGGAGGAAGCCGACGCGCGCAAGGCGAAATACGAGGAGGCCAAGGCGGCCTTGGATTCCGCCCAATTGGATCTGGAATACTCCAAAGTTCGCGCGCCCATTGATGGCCGCGTCAGTCGCGCTCTGTTGACCGAAGGCAATTATGTCAGCGGCCTGGCCGGTTCCGCCTCGCTGCTGACCACGCTGGTGTCGGTCAACCCGGTTTATGTGTATGCGGACGTGGACGAGAATTCATTGCTCAAGTTCAACGACCTCGTCGCCGCCGGCAAAATGGAGAAAAATGCGGACGGAAAAATTCCGGTGCAATTGCAGCTCGCCGATGAAACGAATTTTCCGCACGAAGGCTACATCGAATCGTTCGACAACCACGTGAATCCGCAAACCGGCAGCATCCTGTTGCGCGCGGTTTTTCCCAACAGCGATGACAAGATCGTGCCCGGTTTGTTCGCCCGCATCCGCGTGCCGTTGAGCGACCGGCATGAAGCCGTGCTGGTGGATGAAAAAGCCATCGGCACCGACCAGTCGCAGAAGTTTGTGCTCACATTAACACCGACGAATACGGTCGCCTACCGCGCGGTCACGCTCGGACCGTCCATTGACGGCAAACGCATCGTTCAATCCGGCCTGAAGCCGGGAGATGAAATCGTCGTTGACGGACTGCAACATGTCCGCCCCGGCTCGCCGGTGACACCCGAACACGCGGTGGCCAGCCATCCCGAATCCAAATTGGAAACCGCGGCGCGCTGA
PROTEIN sequence
Length: 381
MKPNLKHTLFVAIFLGLAAGFSAGCSRAGAQPQTPPPPAVTVAPVEQKEIVEWSEFTGHTEPVDAVEVRPRVSGYIQEVKFHSGQLVKKGDVLFVIDPRWNQAVYDQRKAEYEQARREEARTEQLLANKAISQEEADARKAKYEEAKAALDSAQLDLEYSKVRAPIDGRVSRALLTEGNYVSGLAGSASLLTTLVSVNPVYVYADVDENSLLKFNDLVAAGKMEKNADGKIPVQLQLADETNFPHEGYIESFDNHVNPQTGSILLRAVFPNSDDKIVPGLFARIRVPLSDRHEAVLVDEKAIGTDQSQKFVLTLTPTNTVAYRAVTLGPSIDGKRIVQSGLKPGDEIVVDGLQHVRPGSPVTPEHAVASHPESKLETAAR*