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berkeley_reactor_200306_planktonic_scaffold_64763_32

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 50178..51065

Top 3 Functional Annotations

Value Algorithm Source
AraC family transcriptional regulator n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001744BA4 similarity UNIREF
DB: UNIREF100
  • Identity: 48.2
  • Coverage: 307.0
  • Bit_score: 300
  • Evalue 1.00e-78
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDY19508.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.7
  • Coverage: 291.0
  • Bit_score: 285
  • Evalue 4.80e-74
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 30.6
  • Coverage: 258.0
  • Bit_score: 134
  • Evalue 2.80e-29

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 888
ATGATTGAGCCCCCAGAAGAACTGAAGGACATAACGGTGCACAGCGCCCGCACCCGCATGCGGGGAGTGCAGGCCATCAACGTTGATCCGCGCCCGTGGATTGAAGGGTTTCCCGTTTGCCAGGCGCTGAACCAGTATCAAATGATCCACATCGGCATCCAGGAAACGCATGCTCCGATGAAGATCGTGCGGACCAAGCAGACGACGACTTATTTTTTGGCGTGCGTCAATGGCCGGGGCCGGGTGCTGATTGACGGCCGCTGGCGGATCTGCCGGGAGGGCTACGCCTGTTTGCTGCCGGCCCACACGCTGAACGCCTTCGAGGCCCTGCCGAAATCGGTCTGGGAATTCTGCTGGGTTTGTTATCAGCGCCCGACTGAACAACGCCCCATCGCGGGCGCCACCACGCCGGTGATGGCGCGGTATAATCCGCTGCCGTTGCGTTCGGCCATCCTGGGTTTGATGTATGAAAGCAACGGGCCGGCGCAGCCCCAGTTGATGCACGAGTGGACGGATTTGATCAATGCCTACGTCCTGCGCTTTGCCCAGCCGACCGACCAGCCCGATCAATTGAAATTATTGTGGGAACGGGTCGTTTCCAACCTGGCGGACGACTGGTCCTTGAGCCGGCTGGCGCGGGAGGCCGGCTACAGCAACGAGCATTTGCGGCGACTGTGCCAGCGGCAACTGGGACGAAGCCCGATGCATCAGGTCATCTATTTGCGGATGAAACGGGCCGCGGAATTGCTCGGTTCGACGGACCTGACCATCGAGGCCATTTCACAGGAAATCGGCTATCAAAATCCGTTTGTCTTTTCCAACGCCTTCACCAAGTGGATCGGCTGGCGGCCGTCTGAATACCGGCGCAAGAAATTCGCCAAGACCTGA
PROTEIN sequence
Length: 296
MIEPPEELKDITVHSARTRMRGVQAINVDPRPWIEGFPVCQALNQYQMIHIGIQETHAPMKIVRTKQTTTYFLACVNGRGRVLIDGRWRICREGYACLLPAHTLNAFEALPKSVWEFCWVCYQRPTEQRPIAGATTPVMARYNPLPLRSAILGLMYESNGPAQPQLMHEWTDLINAYVLRFAQPTDQPDQLKLLWERVVSNLADDWSLSRLAREAGYSNEHLRRLCQRQLGRSPMHQVIYLRMKRAAELLGSTDLTIEAISQEIGYQNPFVFSNAFTKWIGWRPSEYRRKKFAKT*