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berkeley_reactor_200306_planktonic_scaffold_64763_47

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(80319..83447)

Top 3 Functional Annotations

Value Algorithm Source
heavy metal efflux pump; K15726 cobalt-zinc-cadmium resistance protein CzcA id=24433491 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 1029.0
  • Bit_score: 1263
  • Evalue 0.0
CzcA family heavy metal efflux protein similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 1031.0
  • Bit_score: 1046
  • Evalue 0.0
Tax=RBG_16_RIF_WS3X_71_46_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.7
  • Coverage: 1029.0
  • Bit_score: 1263
  • Evalue 0.0

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Taxonomy

RBG_16_RIF_WS3X_71_46_curated → RIF-WS3X → Bacteria

Sequences

DNA sequence
Length: 3129
ATGATCAATCACCTTCTCAATTTCTCCGTGCGCCAGCGAATGCTGGTGTTGCTCGCCACGGCGGTGCTGGTCGGTTTTGGCTGGCTCTCGCTCAGGCAGATTCCCATTGATGCGTTTCCCGACGTGACCAACGTGCAGGTGCAGGTGCTTGCCACCGCCGGCGGGATGTCGCCGCCGGAAGTGGAAAAACTCGTGACCTGGCCGATTGAAATCGAACTCGGCGGCCTGCCGCGACTTGAAGAAATCCGCTCCGTTTCCAAAATCGGTTTGAGCGCGATCACCGTCGTGTTCGAAGATGGCGTGGATGATTATTTCGCGCGGCAGTTGGTGTTCGAGCGCCTGCAAAGTGCGCGCGACAAATTGCCCGCCAGAGTGGACGCTGAATTAGGCCCCATCTCCACCGGCTTGGGCGAGATTTATCAATACACGCTCGTCAGCAAGGATAAGCGCTATGACGCCACAGAATTGCGCACGCTACAAGATTACGTCGTGCGCCCGATCCTGCGCACGGTTCCCGGCGTGACGGATGTGAATTCGTTCGGCGGCCTAGTGAAGCAATATCAGGTGATTGTCAATCCCGACCGGCTCACCTCCTACAACATCACGTTGCAGCAAGTTTTTGAGGCGTTGGAAAAGAACAATGAAAACGCCAGCGGCAATTTCATCGAACACAAATCCGAGCAATACGTCGTGCGCGGTTTGGGGCTGGTGAAAAGTGTGGACGACATCGCGAACATCATTGTCGCCACGACGCCCGAGCACGTGCCGGTGTATGTCCGCGACGTGGCGGATGTGAAAATCGGCGCGGAACTCCGCCAGGGCGCCGTCACGGCCAACGGCGAAGGCGAAGCCGTGGCCGGCATCGTGCTGATGCTCAAAGGTGCCAGCGGCCGCGACGTGGTGAACGCGGTGAAAGCCAAATTGCCCGCGATTCAAAAGGCGCTGCCCAAGGGCGTGGAGCTGGTGCCGTTTTATGATCGCACGGATTTGGTGAAAAAGGCGATTCACACCGTCACCAAGGCGTTGCAGGAAGGCGCGATTTTCGTGCTGCTGATTTTGATCGTGCTGCTGGCCGACGTGCGAAGCGCCATCATTGTGACGCTGGTGCTGCCGCTGGCGGCGTTGTTCGCGTTCATCATGATGCGCTGGCAGGGCATCAGCGCGAATCTCATGTCGCTCGGCGGCCTCGCCATCGGCATCGGCATGATGGTGGACGGCGCGGTGGTGATGGTGGAAAACATTCACCGGCATCTGACGGAAAAACCCGCGACGGACGCCAGCAAAACCGAAGTCGTGCTTTACGCGGCGAAGGAAGTGGGCCGGCCAATCGTGTTCGGCATTTTCATCATCATCGCGGTGTTTCTGCCGCTGTTCACGCTGCAGGGGTTTGAAGGCAAGATGTTCAGTCCGCTGGCGTTCACGATCTCGTTCGCGCTGCTCGGCTCGCTCATTTTGTCGCTCACGCTGGTGCCGATGCTGGCGACGTTTTTCCTCAAGCAGGAGTTGCATACGCAGGATCCCATTCACATTCGCGGATTGAAACGCGGTTACCGCGCTTTGCTGGAGCCGTGCGTGCGGCGGCCGTGGCTGGTGGTGATTCCCGCCGTGCTGGCGCTGGCCGGATCGCTGGCGCTGGTGCCGCGCATCGGCACGGAATTTTTGCCGTCGCTGGACGAAGGCTCGGTCGCCGTGCAAACGTTCCGTATTCCGAGCATTTCCCTGACGAAATCACTGGAACTGCAAACCCGGGCGGAAAAAATCCTGAAACAGTTTCCCGAAGTCATTGATGTGGTTTCCAAGACCGGCCGGGCGGACATCGCGTCGGACCCGATGGGCGTGGAAGTCAGCGACGTAATTGTCACGCTCAAACCGCATGAGGAATGGACCACCACGAAATCCAAGGATGAACTCGTGGAAAAAATGCGCGCCGCGCTGGCGGAATTGCCCGGCGTGGCGTCGAGTTTTTCGCAGCCGATTGCGCTGCGCGTGGATGAACTGGTCAGCGGCGTAAAATCCGCCATCGGCATCAAAATTTTTGGCGACGACCTGGACGTGTTGAAAACGAAGGGCGAAGCCGTCGCGCGCGTGCTGAACACCATTCCCGGCGCCGCCGACGTGAACGTGGAGAAAGTCAGCGGTCTGGCGTATTTGCAGGTGGAGATTGACCGCGCCAAAATCGCCCGTTACGGCATCAACGTCGCGGACATTCAGGAAGTGGTGGAAACCGCCATCGGCGGCAAGGAAGCCAGCAAGGTGTATGAAGGCATGAAAGTGTTCGGCTTGAATGTGCGATTCCCGGAATCCGCCCGCAATGATGTGGAACCCATTCGGAACATTCTAATCTCATCGCCACAGGGCGCCCTGATCCCGCTCGGCCAGCTTGCGCAGGTTTATGTCACCGAAGGGCCGGCGCAAATCAGCCGCGAACAGGCGCAACGCCGCATCGTCGTGGAAGGCAATGTCACCGGGCGCGATCTCGGCGGCTTTGTGAAGGAAGCCCAGCAGAAGATTGATGCCGCCGTCCAGTTGCCGCCGGGATATTACCTCACCTGGGGTGGCCAATTTGAAAACCAGCAGCGCGCGATGAAGCGTTTCGCCATCGTTGTGCCGATCACGATTGCGGCGATTTTCCTGCTGCTGTTCAGCTCGTTCAATTCCGTGAAACAGGCGCTGCTCATCATCCTGAACATTCCGTTCGCGCTCATCGGCGGCATTCTGGCGCTGATCATCGGCCACTTCAACCTGAGCGTCAGCGCCAGCGTCGGGTTCATCGCGCTGTTCGGCGTGGCGGTGTTGAACGGCGTGGTGATGGTCAGCTATTTCAACGAACTGCGGCGCGAAGGCATGAAGATCGAACTGGCGGTCATCAAAGGCGCGGTGCTGCGGCTGCGACCGGTGCTCATTACCGCGAGCGTGGCGGCGCTCGGCCTCGTGCCGATGCTGTTCGCCACCGGGCCGGGCAGCGAAATCCAAAAGCCGCTCGCGGCGGTCGTCATCGGCGGACTGGTCAGCTCGACGCTGCTCACGTTGTTCATGCTGCCCACGCTTTACAAAGTGTTCGAGCGCGAATCCAAAACGGATGACGCCGTGCACCTGCCCGAGCCGCCGGCAACGACGGAGCTAACTTGA
PROTEIN sequence
Length: 1043
MINHLLNFSVRQRMLVLLATAVLVGFGWLSLRQIPIDAFPDVTNVQVQVLATAGGMSPPEVEKLVTWPIEIELGGLPRLEEIRSVSKIGLSAITVVFEDGVDDYFARQLVFERLQSARDKLPARVDAELGPISTGLGEIYQYTLVSKDKRYDATELRTLQDYVVRPILRTVPGVTDVNSFGGLVKQYQVIVNPDRLTSYNITLQQVFEALEKNNENASGNFIEHKSEQYVVRGLGLVKSVDDIANIIVATTPEHVPVYVRDVADVKIGAELRQGAVTANGEGEAVAGIVLMLKGASGRDVVNAVKAKLPAIQKALPKGVELVPFYDRTDLVKKAIHTVTKALQEGAIFVLLILIVLLADVRSAIIVTLVLPLAALFAFIMMRWQGISANLMSLGGLAIGIGMMVDGAVVMVENIHRHLTEKPATDASKTEVVLYAAKEVGRPIVFGIFIIIAVFLPLFTLQGFEGKMFSPLAFTISFALLGSLILSLTLVPMLATFFLKQELHTQDPIHIRGLKRGYRALLEPCVRRPWLVVIPAVLALAGSLALVPRIGTEFLPSLDEGSVAVQTFRIPSISLTKSLELQTRAEKILKQFPEVIDVVSKTGRADIASDPMGVEVSDVIVTLKPHEEWTTTKSKDELVEKMRAALAELPGVASSFSQPIALRVDELVSGVKSAIGIKIFGDDLDVLKTKGEAVARVLNTIPGAADVNVEKVSGLAYLQVEIDRAKIARYGINVADIQEVVETAIGGKEASKVYEGMKVFGLNVRFPESARNDVEPIRNILISSPQGALIPLGQLAQVYVTEGPAQISREQAQRRIVVEGNVTGRDLGGFVKEAQQKIDAAVQLPPGYYLTWGGQFENQQRAMKRFAIVVPITIAAIFLLLFSSFNSVKQALLIILNIPFALIGGILALIIGHFNLSVSASVGFIALFGVAVLNGVVMVSYFNELRREGMKIELAVIKGAVLRLRPVLITASVAALGLVPMLFATGPGSEIQKPLAAVVIGGLVSSTLLTLFMLPTLYKVFERESKTDDAVHLPEPPATTELT*