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berkeley_reactor_200306_planktonic_scaffold_78559_37

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(43098..44159)

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus retraction protein PilT id=3730157 bin=GWF2_Planctomycetes_50_10 species=Clostridiaceae bacterium L21-TH-D2 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Planctomycetes_50_10 organism_group=Planctomycetes similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 345.0
  • Bit_score: 377
  • Evalue 7.90e-102
twitching motility protein PilT similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 345.0
  • Bit_score: 303
  • Evalue 4.10e-80
Tax=BJP_IG2102_BRC1_58_13 similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 348.0
  • Bit_score: 414
  • Evalue 8.20e-113

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Taxonomy

BJP_IG2102_BRC1_58_13 → BRC1 → Bacteria

Sequences

DNA sequence
Length: 1062
ATGAACAATCAAACCTTGAACCGGCTGCTGTCGGCCGTGAATGAATTCGATGCCTCGGACCTGCACCTGGTGGCGGGCGTGCCGCCGGCGTTCCGGGTGAACGGCGAAATCATCATCGCCGACGAAGACGCGCTGACCATTGAGGACATCACCGAAATGGCCGACAGCCTGATGAACGACCAGCAGCGGAAGAAGTTCGAGGAGGAATGGGAGCTGTGCATCTCGATTTTGCACAGCGCCGCCGGCCGCGTGCGCGCCACGTTTTACCGGCGGAACACGCACCCGGAAATGAGCTTCCGTTTCTGCGGCGAAAAAATCTCGACGCGCACCGAACTGGGCTTGCCGGACAAGCTGGACGAACTGGCGCGCAAGCCGAACGGATTGGTGCTGATCACCGGCCCGACCGGCGCGGGCAAGACCACGACGCTGAATTATCTCGTGGACCTGATCAACAACGAGCGCCGCTGCAAAATTGTGACGATTGAAGATCCCATTGAATTCGTGCATGAAAACAAGCGCGCCATCGTGGTGCAGCAGGAGGTGTTGACGGATGTGCGGTCGTTCAACCGCGCGTTGATTCACGTTTTGCGGCAGGATCCGGACGTCATTGTCGTCGGCGAAATTCGCGATCACGAAGCGATTTCCACCGCTTTGACCGCGGCGGAAACCGGCCATCTGGTGCTGGCCACCATGCACTCGCCGAACGTCTCCCACGCGCTCGAACGCATCATCGGCGTCTTCGAAGGCAGCTCGCAAAAACAAATCATCCTGCAGCTCGCCAACGCGCTCCAGGGCATCATCGCGCAGGATTTGCTGCCGTCGGCCGACCGCAACAAGCGCGTCCTCGCGTATGAACTGCTCGTGGCCACCGGCGCGGTGCGCAATTTGATCCGTGAAAACCAAATGCACCATTTGGAAAACACGATTCAAATGGGCCGCAAGGACGGCATGGTGCTCATGGACAATTGTCTCTACGATCTTTACTGCAAATGCGCCATCACCTACGACACGGCGGTCAGCCGGGCGCGGCATCCGGACCGGATCACCCGGACGAACGGATGA
PROTEIN sequence
Length: 354
MNNQTLNRLLSAVNEFDASDLHLVAGVPPAFRVNGEIIIADEDALTIEDITEMADSLMNDQQRKKFEEEWELCISILHSAAGRVRATFYRRNTHPEMSFRFCGEKISTRTELGLPDKLDELARKPNGLVLITGPTGAGKTTTLNYLVDLINNERRCKIVTIEDPIEFVHENKRAIVVQQEVLTDVRSFNRALIHVLRQDPDVIVVGEIRDHEAISTALTAAETGHLVLATMHSPNVSHALERIIGVFEGSSQKQIILQLANALQGIIAQDLLPSADRNKRVLAYELLVATGAVRNLIRENQMHHLENTIQMGRKDGMVLMDNCLYDLYCKCAITYDTAVSRARHPDRITRTNG*