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berkeley_reactor_200306_planktonic_scaffold_78559_145

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 176253..180461

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Immunoglobulin I-set domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIN7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 28.4
  • Coverage: 771.0
  • Bit_score: 234
  • Evalue 4.30e-58
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF60300.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 771.0
  • Bit_score: 234
  • Evalue 6.00e-58
cell wall/surface repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 24.5
  • Coverage: 864.0
  • Bit_score: 145
  • Evalue 7.40e-32

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 4209
ATGAAACAGGGGATCTCATTTAGGTTTTTTCGCGCCTCCATTTCCACATTTTCGCTGGTTGCGAGTGTCAGTATCGTTTTCGCCAACTTGACCGAACTTCGTGCCCAAACGACAAATTGCACACCCGCACCGTCCGGCCTGGTTGGCTGGTGGAAGGGGGATGGCAATGCGATGGATTCTGTGGCGACCAACAACGGAACACTCGTAAATGTCGCCTACACCAATGGCGTCGTTGGCCAGGCGTTTTCTTTCGACCCGGAAAACTATCCGTGGGGAACTTACAACGGCGTCCAAATTCCTGATCAACCCGCTTACGCTTTAACCAACGCCCTGACCATCGAAGGCTGGATTCGGCCAAGAGGTGATGGTTACAATATTTTCTGGCGCGGAGACAACCGACCCGGATATGACCCATACTTCCTGTCCATGGACGGAGGGCACCACCTCGCCTTTTATGTGGAAAATGCCGCCAACGTCAGCGACAAGGTAACCACAACCATCAACTATGATGAATGGCTTCATATTGCTGCCACCTATGACAGCACCACTGGCACTTTGAGCCTTTACACCAATGGGGTTCTGGCCGCCCAGAAAACTACCAGCATTCGACCTTTTGGAGATTTGAATCCTAACCTGCATCCCGGCATTGGCATTGGCAATGTCAATGACGGCGGAAATAATTTCCCGTTCATTGGAGACATTGATGAGATTTCGCTCTACAACCGCGCGCTGTCGCCCTCTGAAATTGCGGCCATTTACGAGGCTGGCAGCGCGGGCAAATGCCTGTCCCCGTCCGGAGTTCCCACTGTAATTGCCGGCCCTGTTACCAATTCCGCCAATGGACATGCCTACTTCCTGTTAAGTTCGAGCAGCTGGACGAATGCCGAGGCCAAGGCGGTGTCCTTGGGCGGACATTTGGTCACCATCAATGACGCCAACGAAAACGCCTGGGTGCAATCCACATTCGGAGCCAATGGAACCCGCGCTCTATGGATCGGGCTCAGCGATGCCGCATCGGAAGGCAACTTCGTCTGGAGTTCGGGCGAGACCTCCCTTTATCGCAACTGGTCCAGTGGTGAACCCAACAATTACGGCGGCAACGAAAACTATGCCTACATCGGTTACCCGACGTTCTCGGATGGAACGTGGAACGATCAGCCCGATAATGCAGTAAATCCTCTTTCCGGGGCGGACTTGCGGGGTGAAGTTTATGGCGTTGTGGAACTGCCTTCCTCGACAGGCGGCAGTAATGAATGCCTGCCCGCGCCGTCCGGCTTGGTGGCCTGGTGGAAGGGAGAAAACAACGCCCAAGACGCAGTGGGGGGAAATAATGGCATGCTTCTCGGAGAAACCGATTTCACTCCAGCCGAAGTGGGGCAAGGATTCAACTTTGACGGCACCGAGCCTTCCAGTGTTCACATCCCTTACAATCCGGACTTGATCACCTCCAACTACACGGTTGAAGCCTGGATTGATCCCACCGCACAGGTTACCGGTGGCATTGGCCAAACACTCATTTTCGGTCAGTCTTACGGCCAAGTTCAACTCGTGGTCCGCACCGGCACAACCGGCGTTCGGGTGGTATTCCAATTCGGCATTGACCATTACAACTTTTACCAGGTGCAGAGCACCAACGAGATTCCCATCGGCCAGTTAACTCACGTTACCGGCACTTGGGACGGAACCAAGCTTGAGCTCTATATCAATGGTGTATTGAATGCGGTAAACATACCGGGAACACATCCGGTTGACTCGGGCTGCGACTTTTTTATTGGTGGCTTTAACTCGCCTGAAATTGATGACTGCCAATATGTCGGTCAATTCTTCCAAGGCATGGTGGATGAGTTGAGTTATTACAACCGGGCTCTTTCCCAATCTGAAATTGCAAGTATTTACCATGCCGGCAGCGCGGGCAAATGCGTGGCCCCCACCACGAATAATACGCCCGTGCTGGTGGATGTGGATTTCGGCGGCGGCGGCATCCGCCCCAGCGCCGAAGCCGGTCCGGCGGCCATTGGCCGGGACAGTTTCGACTTCTGGAACTTCTATACCCGCGATGATACCAACGGCAACTGGCTGACCTTCGGCATCCTGCCCAACCTCAAGCTGGTGGACGGCACTGTCACCGACATCGGCCTGACCGTGGACAACGCACCGGGCGACTGGGGCAACGGCTCCACCGATCCCATGTTCAATGATTACATTTACCCGTTCAACGGCGGCAATGTCACCATCACCGTGACCAACCTGCCACCCGGCAGTTACAACCTTTACGCGTATTCATCCGACAGCAGCTATCAAGTAAACTCGGGAGGAATGAATTACGGGATTCGATCCACCTATGAACCGATGGCAACCAATCCGCCGGTCTGGATTGAAGGCGTCTCTTACGTCCGGTTTACGAATGTCGTCGTGACTGCCGGCCAGCCGCTGGTGTTGACCGCCTTGCCATTACACGACGTGGCCAACATCTCCGGGTTGCAGATCGTTTCCTCCGGAACCACCAACCCGAACCCGCCAACCATCACCTGCACACCCGCACCGTCCGGCCTGGTTGGCTGGTGGAAGGGGGATGGCAACGCAATGGATTCTGTGGCGACCAACAACGGAACACTCGTAAATGTCGCCTACACCAATGGCGTCGTTGGCCAGGCGTTTTCTTTCGACCCGGAAAGCTATCCGTGGGGAACTTACAACGGCGTCCAAATTCCAGACCAGCCGGCATATGCCGCACTAACCAATTCGTTGACCATCGAAGGCTGGGTCAGACCGCGCGGGGACGGATGGGTTATTTTCCATCGTGGAGACAATCGCCCGGGATACGATCCATTCACACTTTCGATGCAACAAAATCATGATTTGCGTTTCCTCGTTCAGGATGCAAACAACAACCAGGCTTTTGTAGATACCACCCTTGCCTATGATCAATGGACGCATGTCGCCGCCACCTTGGACGGCAGCTCAGGAAGTTTAAGCCTTTATACCAACGGTGTATTGGCAGCTCAGACAACTACTGACGTCAGACCTGCCGGAGCACTAATTGCCGAAGACCATCCGGGGGTATGCATTGGGAATGAAAACGACGGATTTAATAATTTCGCGTTCGTTGGAGATATTGACGAAATCTCGCTCTACAACCGCGCGCTGGCACCCTCTGAAATCACATCCATCTACCATGCCGGCAGCGCCGGGAAATGTTCCGTGCCACCTACAGTGCTTAACGTGACTCCGACAAACCTTTACGTGAACGAAGGCACCACTGCGGCTTTCACTGTCCAGGCCACCGGCTCTCAAATTTCAGGTTATCAATGGCAGCACGAAGGCAGGGATATACCCAACGCCACAAACTCTACACTGGTTTTGAGCAATGTAGTTTATTCACAGAATGGCAACTATGATGTTATCGTGTCCAGTGCGGATGGCTGGGCAGTCAGTTCAAATGTCGTGCTCAAGGTCAATCGCGCCCCGGTTGCCGATGCCAGCGCCACCGAACCGCTCACGGTTTCGCCGAACGCCTCCAACGCGGTGGTGGTGTTGAACGCATCCAAATCCAGCGATCCCGATGGTGATGCGCTGACGTATGCCTGGTTCTACGCAAATGAAACCGATCCGATTGCCACCGGATTGGTCGCGTTAAGGACATTGCCGGTGGGCACGAACCAGCTTGAATTGGCGGTGGACGATGGCATGGCCTTCCGCCGCCAGCCATTCAGCATCGAAGTCGTTACCATTTCCCAGGCCGTGGATCGCCTGGCGGCCATGAGCCAATCCGGTTCGACCAACAACTCATTCCTGGTGGGTTCGCTGGAAGCAGCCCTGGCCTCGATGGATCACCGCCACCCGCAAACCGCCATCAGCCGGCTGCGAGCGTTCATCAACCAGGTTCAGACCCGGTTGCGCCCCCTTGATCCCGGCCTGGCGGCGCAATTAATCGCCGATGCGCAATCCATTATTGGCGCATTACGGGGCGGAACCGCCATCCCCGCCGCCCATGTCGCGATCACAGCCATTACCCACGATCAAAATGGCCGGGCCCACCTCAAACTCAAGGGCGTCTGCGGCTGCGCCAATGTCGTTGAAACTTCCACCAACATGGTGGACTGGGTGCCGGTTGGTGTGGCCACCGAAAATAGTGACGGCACTTATGATTTCGATGACACGCAGTCTCCCAACGCCGGCATGCGTTTCTATCGAGTGGTGGCGCATTAA
PROTEIN sequence
Length: 1403
MKQGISFRFFRASISTFSLVASVSIVFANLTELRAQTTNCTPAPSGLVGWWKGDGNAMDSVATNNGTLVNVAYTNGVVGQAFSFDPENYPWGTYNGVQIPDQPAYALTNALTIEGWIRPRGDGYNIFWRGDNRPGYDPYFLSMDGGHHLAFYVENAANVSDKVTTTINYDEWLHIAATYDSTTGTLSLYTNGVLAAQKTTSIRPFGDLNPNLHPGIGIGNVNDGGNNFPFIGDIDEISLYNRALSPSEIAAIYEAGSAGKCLSPSGVPTVIAGPVTNSANGHAYFLLSSSSWTNAEAKAVSLGGHLVTINDANENAWVQSTFGANGTRALWIGLSDAASEGNFVWSSGETSLYRNWSSGEPNNYGGNENYAYIGYPTFSDGTWNDQPDNAVNPLSGADLRGEVYGVVELPSSTGGSNECLPAPSGLVAWWKGENNAQDAVGGNNGMLLGETDFTPAEVGQGFNFDGTEPSSVHIPYNPDLITSNYTVEAWIDPTAQVTGGIGQTLIFGQSYGQVQLVVRTGTTGVRVVFQFGIDHYNFYQVQSTNEIPIGQLTHVTGTWDGTKLELYINGVLNAVNIPGTHPVDSGCDFFIGGFNSPEIDDCQYVGQFFQGMVDELSYYNRALSQSEIASIYHAGSAGKCVAPTTNNTPVLVDVDFGGGGIRPSAEAGPAAIGRDSFDFWNFYTRDDTNGNWLTFGILPNLKLVDGTVTDIGLTVDNAPGDWGNGSTDPMFNDYIYPFNGGNVTITVTNLPPGSYNLYAYSSDSSYQVNSGGMNYGIRSTYEPMATNPPVWIEGVSYVRFTNVVVTAGQPLVLTALPLHDVANISGLQIVSSGTTNPNPPTITCTPAPSGLVGWWKGDGNAMDSVATNNGTLVNVAYTNGVVGQAFSFDPESYPWGTYNGVQIPDQPAYAALTNSLTIEGWVRPRGDGWVIFHRGDNRPGYDPFTLSMQQNHDLRFLVQDANNNQAFVDTTLAYDQWTHVAATLDGSSGSLSLYTNGVLAAQTTTDVRPAGALIAEDHPGVCIGNENDGFNNFAFVGDIDEISLYNRALAPSEITSIYHAGSAGKCSVPPTVLNVTPTNLYVNEGTTAAFTVQATGSQISGYQWQHEGRDIPNATNSTLVLSNVVYSQNGNYDVIVSSADGWAVSSNVVLKVNRAPVADASATEPLTVSPNASNAVVVLNASKSSDPDGDALTYAWFYANETDPIATGLVALRTLPVGTNQLELAVDDGMAFRRQPFSIEVVTISQAVDRLAAMSQSGSTNNSFLVGSLEAALASMDHRHPQTAISRLRAFINQVQTRLRPLDPGLAAQLIADAQSIIGALRGGTAIPAAHVAITAITHDQNGRAHLKLKGVCGCANVVETSTNMVDWVPVGVATENSDGTYDFDDTQSPNAGMRFYRVVAH*