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berkeley_reactor_200306_planktonic_scaffold_78559_147

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 181242..182594

Top 3 Functional Annotations

Value Algorithm Source
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 460.0
  • Bit_score: 543
  • Evalue 1.50e-151
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-N20 RepID=UPI000366A7ED similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 452.0
  • Bit_score: 632
  • Evalue 3.00e-178
dimethylallyladenosine tRNA methylthiotransferase similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 450.0
  • Bit_score: 486
  • Evalue 4.40e-135

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1353
ATGCCGAGCGTCTATATCAAAACTTACGGTTGTCAGATGAACGAGCGCGACAGCGAAGCCGTCGCCGCCCAACTCGTGGCCAAAGGCTATTCCCTCGCCTCCTCCGAGGCCGCCGCCGATGTGGTGCTGCTCAACACGTGCAGCGTCCGCGATTTCGCCGAGCAAAAGGCCATCAACAAAATGCGCAATCTCATCGGCACGGCGCGCAGCGAAAAGCGCGAGCAGATCGTCGGCTTCATGGGCTGCATGGCGCAAAGCCGGGGCAAGGAACTGGTGGACACGCTGCCGGATGTGGACCTGGTGCTCGGCACGCAAAAATTTCATCGCGCCGCGGCATACCTTGACGAACTGCTCGCCGGCAAACGGGAGAAAATCGTGGACACGGATGCCGAGGCGAAAAGTGAGGCCGCTATTCGCGAACACCTGCTGAACGGCAGCGCCAAAACCTCCGTCTCCGCCTTTGTCAGCATCATGCAAGGCTGCAACCAGCATTGCACGTTTTGCATCGTGCCTTCCACGCGCGGCGAAGAACGCAGCCGGACGATTCCCGACATTGTCGCGGAATGCCGCGAACTCGTCGCGCGTGGCGTCAAGGAAATCACGTTGCTCGGCCAGATTGTCACGAGCTTTGCCAAACGCGATTTACCCGTGAACAATGGCAAAACGCCGTTTGTCCAGCTGCTCGAAGCCGTTCACGAAATCGAGGGCTTGGAACGCATCCGTTTCACCTCGCCGCATCCGAAAGGTTACGGCGACGATTTGGTGGAAGCCTACGCGCGCCTGCCGAAACTTTGCGAAAGCGCGCACATTCCGCTGCAAAGCGGCAGCGACCGACTGCTGAAGCTGATGCATCGCGGCTACACGCGGGAGAAATTCATCGGCATCATCAAAAAACTGCGCGCCGCCCAGCCGAACATCGGCATCTACACCGACATCATCGTCGGGTTTCCGGGTGAGACGGAGGAAGATTTTGAACAGACAATGTCGCTGTGCCGCGAAGTGGAATTCGACAACGCCTACATTTTCAAATACTCGCCGCGCCGCGACACGCCCGCCGCCGAAATGCCCGATCAGGTGCCACAGGAAATCCGCGAAGAGCGCAATCATCGCCTGCTGGAACTGGTCAATGAAATTGCCGCGCGCAAATACGACAAGTTCATCGGCCAACAAGTGCAGATTCTCGTGGAAGGACCGAGCAAGAAGAACGCCGCACGCTACACCGGCCGCACGCGCTGCAACCGCATCGTGCTGTTCGACGGCGACCAGCGCCATCACGGCCAGCTCATGGACGTGAAGATCGAACGCACCGGCTCCTTCACGCTCTACGGCGACCCGGCGATTCTGAATTTATAG
PROTEIN sequence
Length: 451
MPSVYIKTYGCQMNERDSEAVAAQLVAKGYSLASSEAAADVVLLNTCSVRDFAEQKAINKMRNLIGTARSEKREQIVGFMGCMAQSRGKELVDTLPDVDLVLGTQKFHRAAAYLDELLAGKREKIVDTDAEAKSEAAIREHLLNGSAKTSVSAFVSIMQGCNQHCTFCIVPSTRGEERSRTIPDIVAECRELVARGVKEITLLGQIVTSFAKRDLPVNNGKTPFVQLLEAVHEIEGLERIRFTSPHPKGYGDDLVEAYARLPKLCESAHIPLQSGSDRLLKLMHRGYTREKFIGIIKKLRAAQPNIGIYTDIIVGFPGETEEDFEQTMSLCREVEFDNAYIFKYSPRRDTPAAEMPDQVPQEIREERNHRLLELVNEIAARKYDKFIGQQVQILVEGPSKKNAARYTGRTRCNRIVLFDGDQRHHGQLMDVKIERTGSFTLYGDPAILNL*