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berkeley_reactor_200306_planktonic_scaffold_78559_175

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 207734..208300

Top 3 Functional Annotations

Value Algorithm Source
Rod shape-determining protein MreD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XG15_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 183.0
  • Bit_score: 219
  • Evalue 1.90e-54
Rod shape-determining protein MreD {ECO:0000313|EMBL:EEF61177.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.7
  • Coverage: 183.0
  • Bit_score: 219
  • Evalue 2.70e-54

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 567
ATGAATTTTTTCACGCCCATCTTGATTTTGTCCGCCGCGTTCCTGGCGGTGTTTGGCGAGGCGACGCTCACGTTTCCGCGCCAGCTGCTCGGGGCGCAGGTGAATTTGCTGCCGGCGCTAATGGTGTATGCGGCGCTCAATTCCAATTTGCCCACCATCGCCGCGCTGGCGGTTTTCGGCGGATTGTGGTTCGACACGTTTTCCGCCAATCCGCTGGGCGTTTCCATTCTGCCGCTGTTGATCGTCGGGTTTCCGCTTTATCTGCGCCGCGACCTGCTGCTGCGCGAGGCGCCGTTTGCCCAGTTCGTGCTGGGCGCGGCGGCGAGCGCGGTGGCACCGGTGCTGACCTTGCTGATGCTGTTGAGCGGCAGCCACAATCCGCTCCTCGGCTGGGGCTCCCTCTGGCAATGGCTGGTGCTGACCGCCGGCGGCGCGGTGGCGACGCCGTTTATTTTTACATTGTTGAACCGCTGCGAAAGCGCGCTCGGTTATCAACCGCGCACGGAAACAAGTTTCCGCCCCGACCGCGAAATTCAGCGGGGCAGGAAAACCAATTTAAAGATATAA
PROTEIN sequence
Length: 189
MNFFTPILILSAAFLAVFGEATLTFPRQLLGAQVNLLPALMVYAALNSNLPTIAALAVFGGLWFDTFSANPLGVSILPLLIVGFPLYLRRDLLLREAPFAQFVLGAAASAVAPVLTLLMLLSGSHNPLLGWGSLWQWLVLTAGGAVATPFIFTLLNRCESALGYQPRTETSFRPDREIQRGRKTNLKI*