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berkeley_reactor_200306_planktonic_scaffold_78559_192

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 231391..233271

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XT30_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.0
  • Coverage: 606.0
  • Bit_score: 844
  • Evalue 5.30e-242
GreA/GreB family elongation factor {ECO:0000313|EMBL:EEF57004.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.0
  • Coverage: 606.0
  • Bit_score: 844
  • Evalue 7.40e-242
greA; transcription elongation factor GreA fused to uncharacterized associated domain similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 612.0
  • Bit_score: 380
  • Evalue 6.10e-103

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1881
ATGAAAGAAGAATTCGAAAAACTGGCAGCCGCGGGGAAAATCGAAGGGCGTCACGTCGCGCCCCTGACCGAGCTGGCGGAAGCCGGCTGTTGCACGCATCGCAGTTGGGGCTTTGGGCGCATCAAGACCGTGGACACGGTGTTTGCGCGGTTCACGATTGATTTTCAAGGCAAGCCGGGCCATCCGATGGATCTGGCGTTTGCCGCCGAATCGCTCAAGCCGGTGCCGAAGGACCACATTCTGGCGCGCAAGGCGACGGACATTGACGCGGTGCGGCATCTGGCGGCACATCACATTGATTTGATCAAAATCGTGCTGAACAGCTACGGCGGGAAGGCGACGGCCGAGCAGGTGCAGCAGGTGCTGGTGCCGGACGTGATTGCCGATGACTGGAAAAAATGGTGGGAAACCGCCCGGCGCGAAATGAAGAAGGACGGCCATTTCATCGTGCCAGCCAAGAAGACCGAGTCCATCGTTTACCAGGAGCAGGAAGTTTCCCTGCAGGAGCGGTTGCTGGCGGATTTTCGCGCGGCCAAGGGGCTCAAAGCCCACATCGCCGTGGTGTCGGAGATGATCAAGGTGATCGCCGATCTGCGGGACAAAGCCGCGGCGGCCAGGGAAGTCATTGCAGTGTTGAATCCGGAGATCGTCTCCCACCAGCGCACGCAGCCGGCGGTGGCGCTGGAAGCGGTGTTTGCGCGGGACGAACTGCGGCATGCGGCCGGTCTCGAACCGGATGCCAGCGAAGTCACCTCCGCGCAAATCTGGTCGCAGGACGGCATCAAATTCGGGCCGTTGCTCGAGAGCATTCCCGCCGCGAAACATCATCGCGCACTGGATTCGTTCAAGGTGGCCAATCCCGACACGTGGGAGGAGACGCTACGCGGCGCGTTGAACCTGGTTTCGGCCAAGCTCGCCAAGGAGATCGCCAGCATTCTGGTGCATAGCGGCAAGCTGGAGCAGTTGAAGGAAACGCTCTCGAAGCTCATCAGCCAGCACACGGCCAGCAGTGAATTGCTGCTCTGGTTCGGCCGCGAGCGCAACGATGACTACGCGGACATTCTCGGGCCCGAAGTTTTTCGCGCCATGCTGACCGCGATGGAACGCGATCAATTCAACGAGAAGCGCTCCAACCGCCTGCGCGATTTCATTCTGGAGGACCAGGATCTGCTCGGGGAACTGACGGCGTATGCGGACATTGACGTCATCAAGGATCTGACCCGCGCGCTGCAATGGTCGCCCGTGTTTGACGACATGGACAAGCGGTCGCTGCTCGCCCGCCTCGTCAAGGCGCATCCCGCCGTGCAATCGCTCGTCAGCGGCGAACAGACCAAACAGGATTCCGCCCTGCTCGTTTCCTGGGAAAGCCTCGAACGCCGGCGCAAGGAATACGAGGAACTGGTGCAGAAGAAAATCCCCGCCAACTCGAAGGAGATCGCCGTGGCGCGCAGTTACGGCGACTTGCGCGAAAACCATGAATACAAGGCCGCCAAGGAAATGCAGAAAGTGCTCCTGCGCCAGAAAGACGAGCTGGAGGCGGCGCTCACCCGGGCGCGCGGACAGGATTTCGCCAACGCCAAAACCGATGTCGTCGGCCCGGGCACGGTGGTGCGGGCGACGGACCTCACGACCAACCAGGTCGAAACCTTCACAATTCTGGGCGCGTGGGACTCGGACCCCGACCAGGGAATCATCAGCTACCTGACGCCGGTGGCCATGGCCATGCTCAACGCCAAAGTGGGCGACGAGGTGGAATTTGAACTGCACGGCAACAAACGCCGTCATCGGATTGACAAAATTGACGCGTGGAAAACGGAATCCACCGCGGCAGCGGCTCCCGCCGGGGAGACGGCTTCATCGCCAGCCACCCCGCAGGCGTAA
PROTEIN sequence
Length: 627
MKEEFEKLAAAGKIEGRHVAPLTELAEAGCCTHRSWGFGRIKTVDTVFARFTIDFQGKPGHPMDLAFAAESLKPVPKDHILARKATDIDAVRHLAAHHIDLIKIVLNSYGGKATAEQVQQVLVPDVIADDWKKWWETARREMKKDGHFIVPAKKTESIVYQEQEVSLQERLLADFRAAKGLKAHIAVVSEMIKVIADLRDKAAAAREVIAVLNPEIVSHQRTQPAVALEAVFARDELRHAAGLEPDASEVTSAQIWSQDGIKFGPLLESIPAAKHHRALDSFKVANPDTWEETLRGALNLVSAKLAKEIASILVHSGKLEQLKETLSKLISQHTASSELLLWFGRERNDDYADILGPEVFRAMLTAMERDQFNEKRSNRLRDFILEDQDLLGELTAYADIDVIKDLTRALQWSPVFDDMDKRSLLARLVKAHPAVQSLVSGEQTKQDSALLVSWESLERRRKEYEELVQKKIPANSKEIAVARSYGDLRENHEYKAAKEMQKVLLRQKDELEAALTRARGQDFANAKTDVVGPGTVVRATDLTTNQVETFTILGAWDSDPDQGIISYLTPVAMAMLNAKVGDEVEFELHGNKRRHRIDKIDAWKTESTAAAAPAGETASSPATPQA*