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berkeley_reactor_200306_planktonic_scaffold_78559_196

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 235472..236230

Top 3 Functional Annotations

Value Algorithm Source
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRF9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 228.0
  • Bit_score: 234
  • Evalue 7.70e-59
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:EEF57593.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 228.0
  • Bit_score: 234
  • Evalue 1.10e-58
lysine exporter LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 218.0
  • Bit_score: 89
  • Evalue 1.10e-15

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 759
ATGGCGGACATGAATCCAGTTCTGCTGGCCGCGCTGTCGGGCTTTTTTTGCGGCCTGATTTTTTCCTCCATTCCGGTCGGGCCCATCAATTTGACCATTCTCAACGAAGGCGCCCAGCGCGGTTTTTGGTGGGCGCTGCTGATCGGTTTCGGGGCGTCGGTCATGGAGGGCATTTACTGCGCGCTGTCGTTCACCGGTTTTTCCTCGCTGTTCGATGAGGGCGTCATCAAGGCGTTCATGGAGGTGTTCAGCTTTGTTTTCATCCTGTTCATCGGCTTCAAGTTTCTCCTGGCCAAAACCCTGCACGTGACGCCCAAGCTGGAATCCGCCTCGGAAAAGCTGGAGACGCGCCTTGAGGAAAAATTTCACCCGCACTCCGCGTTCATGACCGGCTTCGTGCGCGTGCTGGGGAATCTCGGCGTGCTGCTGTTCTGGATCATTCTCGCGGCGAACCTCATGGCGCATGACTGGGTGAATCCGGACCTGTTTTCCGCCAAGGCCGCCTGCGTCGGCGGCGTGGCACTGGGCACGAACGCGTGGTTCGTCCTGTTGAGCTTTGGCGTTTCGCGCAGCCACGGCCGGATGAGCGAAGCCACGCTGTTGCGCCTGCAACATCTCTCCGGCATTTGCCTGATCGCCTTCGGCATCATCCACGGCACGCATGTCGCCTGGCAACTGGCCCGACACAGCCGCCACCGTCCCTGGCCCGAATACCGCCAAACGCCGAACCCGCCACCGGTTCAACCAAAAAACAATTGA
PROTEIN sequence
Length: 253
MADMNPVLLAALSGFFCGLIFSSIPVGPINLTILNEGAQRGFWWALLIGFGASVMEGIYCALSFTGFSSLFDEGVIKAFMEVFSFVFILFIGFKFLLAKTLHVTPKLESASEKLETRLEEKFHPHSAFMTGFVRVLGNLGVLLFWIILAANLMAHDWVNPDLFSAKAACVGGVALGTNAWFVLLSFGVSRSHGRMSEATLLRLQHLSGICLIAFGIIHGTHVAWQLARHSRHRPWPEYRQTPNPPPVQPKNN*