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berkeley_reactor_200306_planktonic_scaffold_78559_203

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(242214..243554)

Top 3 Functional Annotations

Value Algorithm Source
FeS assembly protein SufD n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEV6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 439.0
  • Bit_score: 521
  • Evalue 4.30e-145
FeS assembly protein SufD {ECO:0000313|EMBL:EEF61820.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 439.0
  • Bit_score: 521
  • Evalue 6.00e-145
iron ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 425.0
  • Bit_score: 365
  • Evalue 1.10e-98

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1341
ATGACGCAAAACGCAAACAACGGAACGGAGCTGCTGGTGGAGAAATTCGCAAAATTCGAGACGGCGGCCACGCAGCCGGCCTGGCTCGCGCCGTTGCGCAAGGCGGGCCTGGCCAGCTTTGCCGACCAGGGTTTTCCAACGTTGCGCGACGAAGACTGGCGGTTCACCAATGTCGCGCCGATCACCAAATTGCCGTTTCAACTGGCTGAAAAAGTGGCGGTCAACGGCGCCGAATCCAAGGCGTTGCAGGCACAGGTGTTCAGCCAGCTTGCCGGTCATCGCCTCGTGTTTGTGAACGGTTTCTTTTCCGCCGAGCTTTCCGAAATCAAGTCGCTGCCCGCGGGCGTGCGCGTGGAAAATCTGGCCGCCACGCTGGCGCAGGATTCCGCGTTCATTGAGAAACATCTCGGCAAATACGCGCACACCGCCAAAAATGCGTTCGCCGGCTTGAACCAGGCGTTTTTCACCGACGGCGCGTTCATCTTCGTGCCGCAAGGCGTGGAAGTCGCCGAGCCGGTGCAGTTGATTTACATTTCTTCCGCCAAACACAACGGCGAAACGATTCTCCCACGCAACCTCATCATCGCCGAGGCAAACAGCAAGCTGACGGTGGTAGAAAGCTACATCAGCACCGGCAACGTCGCTTATTTCACGAACGCCGTGACGGAAATATTGGCCGGCGACAACGCCAATGTTGAACACGTCAAGCTGCAGGATGAAGCGGCGGACGCGTTTCACATCGCGACGATTGCGGGTGAATTCGGCCGCACGAGCCGGGTGAATGTGCATTCGTTCGCGCTCGGCGCCAAGCTGTCGCGCAACAACATCCGCACGAAGCTGGCGGGCGAAGGTTTGGAGTGCGTGCTGAACGGGCTTTACCTGACGCGCAACGAGCAACTGGCGGATCATCACATGATCGTCGAACACGCGCAGCCGCATTGCGCGAGTCATGAGTATTTCAACGGCATTTTGGATGACAAATCGAAGGGCGTTTTTCACGGCCGGATTTTGGTCCAGCAAATCGCGCAGAAAACCGACGCCAAGCAGACGAACAAAAATCTGCTGTTGTCCGACAACGCCAGCGCCGACACCAAGCCGCAGTTGGAAATTTACGCCGACGATGTGAAATGCACGCATGGCGCGACCATCGGCCAGTTGAACGACGAAAGCATTTTTTACCTGCGTGCGCGCGGCATGAGCCTCGACTCGGCGAAGCAGATGTTGATTCACGCCTTTGCCGGCGAGATCATCGAGCGCATCCAGTGCGAAACCGCGCGCGAGGTGATTGACAAGCTGGTGTGGGATCGCCTGGAGGCGAACCCGCATTTGCTGGGGAAGTAA
PROTEIN sequence
Length: 447
MTQNANNGTELLVEKFAKFETAATQPAWLAPLRKAGLASFADQGFPTLRDEDWRFTNVAPITKLPFQLAEKVAVNGAESKALQAQVFSQLAGHRLVFVNGFFSAELSEIKSLPAGVRVENLAATLAQDSAFIEKHLGKYAHTAKNAFAGLNQAFFTDGAFIFVPQGVEVAEPVQLIYISSAKHNGETILPRNLIIAEANSKLTVVESYISTGNVAYFTNAVTEILAGDNANVEHVKLQDEAADAFHIATIAGEFGRTSRVNVHSFALGAKLSRNNIRTKLAGEGLECVLNGLYLTRNEQLADHHMIVEHAQPHCASHEYFNGILDDKSKGVFHGRILVQQIAQKTDAKQTNKNLLLSDNASADTKPQLEIYADDVKCTHGATIGQLNDESIFYLRARGMSLDSAKQMLIHAFAGEIIERIQCETAREVIDKLVWDRLEANPHLLGK*