ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_84741_79

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(87177..89132)

Top 3 Functional Annotations

Value Algorithm Source
F5/8 type C domain protein id=3865945 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Bacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 67.3
  • Coverage: 646.0
  • Bit_score: 924
  • Evalue 4.20e-266
endo-1,4-beta-xylanase similarity KEGG
DB: KEGG
  • Identity: 51.0
  • Coverage: 437.0
  • Bit_score: 463
  • Evalue 9.70e-128
Tax=GWF2_Lentisphaerae_50_93_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.3
  • Coverage: 646.0
  • Bit_score: 924
  • Evalue 5.90e-266

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Lentisphaerae_50_93_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1956
ATGACTATAAAGTTGATCGCAACCATCATCGTTGCCTCAAGTGGACCGCTTCTGTCTCTAACGGCAGCGCCGGTCCCGACCGCCAACGGCGTGCTGCTCGGCTCCTGGAACACGCAGGTGGAGTTTGACGACGCAAAGGTTGTTTGCGGAACGAATGTCGTGTTGAACGATTCATTCACCTCGCAAAATTCCGCCTGGCAGCGCGAGAGCGGCGACTGGCAGGTCGCGGACGGCGTTTTGCAACAGACTTCCGACGCCACGCCGGCGCTGATGAAGTTTGCGTTCACCAATTCCGCGTCGAATTACACCGTTTCCGTCCGGGCCAGAAAAACCGGCGGCGCGGAAGGTTTTCTGGTTGGCTTCGGCGTGCGGGATGATCAGGATTTTTATTGGCTGAATCTCGGTGGCTGGAACGACACCGTCAGCGCGGTGGAGAAAACCGTGGACGGCGAACGCGATCCGATTGGTCCGAAGGTTGAAACTAAAATCGCACCCGGCCGCTGGTATGACATCAAAATTCAAGTCACGGGCCAGCGCATTCAGTGCTTTCTCGACGACCGGCAAATCATTGACTTGACCGATCCTGGATTCGGCGCCGATGCTGCCGCGGAACTGCCGCCAGGCTACGACAAGGCCACGTTTGGCCAGGCGCTGATTCCCGACATGGTGGCCGATCCCAGCATCGTGGACATCAACGGCACCTTTTATTGTTACGCCACCACCGATGGCTGGGGACAAGGACTGGCCACGTCGGGCACGCCGGTGGTCTGGACCTCAAAGGATTTCCTGAACTGGAGTTTTCAAGGATCCAGCTTTCCTTCGGACTTCGATTTGAAGTATTGGGCGCCTAGCAGCCTCGTGCATCGGAACGGACGTTATTATTCGTTCCCGACGTTGGACGGCAAAATCACGGCGGTGGTGGCGGATTCGCCGCTCGGACCTTTTCTGGCGCCGGACGGTCAACACGTGACCAGGGCGACGCTCAAGCCGTTCCCGATTAGACAGAACAGCGCCATTGATGCGGAAGTGTTCATAGACGATGACGGACAGGCACACATGGTTTGGTCGCGTCGCCGCGAGGCGAAGCTCAAGCCCGACCTGCTTTCGCCGGACGGTCCGATGATCACCATTCCCACCAAACGTCAGGGCTATTCCGAAGGACCGTATCTCACCAAGCGCAACGGCATTTACTATTACTTTTACACGCTCGGCGGCGGCGTGAATTACCAATACGCCTACATGATGAGCCGCACGTCGCCGATGGGACCGTGGGAAGCGCCGGAACACGACATCATCGCCACGAGCGATCCGGCGGCAAAAATCTTTGGGCCGGGCCACGGTTGTTTCTTCCATCCGCAAGGCAGCGAACAATGGTATTTCGTTTATCTCGAATACGGGCGCGGCGGCACGACGCGGCAGATTTATGCCAACAAAATGAATTTCAACGCCGACGGCACCATCCAGCCGATCAAGCTGACCAAGGCTGGCGTCGGCGCCGTGCAGCCCGATACGGAAACGACGCCGAATCTGGCGCTGGATTGCCGGGCCACGGCCTCGTCCACCCGCTGGAATTACCGGGTGCGTCCAAGCAATTTGGACCGCGTGGAAGCTTACGCGCCCGCAAATGCCGTGGATGATTCCAACGGCACGCGCTGGCTGGCCGTGCCGGGCGACACAGCGCCGTGGTTTCAGGTGGACCTTGGTGCGCCGCGCGACATCCGCCGCACGGAAGCGTATTTTGTAAAACCCGCCGCCGGCCAAGCGTATCGCATCGAATGGTCGCTCGATGGCAAACAGTGGCACCTTTATGGCGAACACGACGAGGTTGTCATCTGCTCCCCGCATCGCGATGAAAAATCGGTTCGCGCCCGGTATTTGAAGCTGACGATTCGGAAAGGCGAACCGGGACTGTGGGAGTTTCGCGTCTATGGCGGGCCGGCCGACGCGCCGCGATAA
PROTEIN sequence
Length: 652
MTIKLIATIIVASSGPLLSLTAAPVPTANGVLLGSWNTQVEFDDAKVVCGTNVVLNDSFTSQNSAWQRESGDWQVADGVLQQTSDATPALMKFAFTNSASNYTVSVRARKTGGAEGFLVGFGVRDDQDFYWLNLGGWNDTVSAVEKTVDGERDPIGPKVETKIAPGRWYDIKIQVTGQRIQCFLDDRQIIDLTDPGFGADAAAELPPGYDKATFGQALIPDMVADPSIVDINGTFYCYATTDGWGQGLATSGTPVVWTSKDFLNWSFQGSSFPSDFDLKYWAPSSLVHRNGRYYSFPTLDGKITAVVADSPLGPFLAPDGQHVTRATLKPFPIRQNSAIDAEVFIDDDGQAHMVWSRRREAKLKPDLLSPDGPMITIPTKRQGYSEGPYLTKRNGIYYYFYTLGGGVNYQYAYMMSRTSPMGPWEAPEHDIIATSDPAAKIFGPGHGCFFHPQGSEQWYFVYLEYGRGGTTRQIYANKMNFNADGTIQPIKLTKAGVGAVQPDTETTPNLALDCRATASSTRWNYRVRPSNLDRVEAYAPANAVDDSNGTRWLAVPGDTAPWFQVDLGAPRDIRRTEAYFVKPAAGQAYRIEWSLDGKQWHLYGEHDEVVICSPHRDEKSVRARYLKLTIRKGEPGLWEFRVYGGPADAPR*