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berkeley_reactor_200306_planktonic_scaffold_89890_36

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 43548..45668

Top 3 Functional Annotations

Value Algorithm Source
Alpha-N-arabinofuranosidase {ECO:0000313|EMBL:EEF61435.1}; EC=3.2.1.55 {ECO:0000313|EMBL:EEF61435.1};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.2
  • Coverage: 447.0
  • Bit_score: 268
  • Evalue 1.90e-68
Alpha-N-arabinofuranosidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XFS1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 34.2
  • Coverage: 447.0
  • Bit_score: 268
  • Evalue 1.40e-68
peptidoglycan binding protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 249.0
  • Bit_score: 146
  • Evalue 1.70e-32

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2121
ATGAATATACGAAATTCTGTCTGTGCTTTGGTATTGTGCCAATTGCTTGTCGCAAACCTCGCCGTTGCTCAGTACTATGGAGGTTACAACATAAATGTAAGCAGTTCGGCCTTTTACGGCCCCTTTTCTCTTGAATATCGGCCAACAACGGGAGGGCAGCCAGCCTATAATTATAGTGTTCATATGATTCGCGAGAGCACTGGAACTCGTTTTCGTGCATTTATTGGCGGTCGCTGGAAGTCAAGTTTGGGCGATGGTGATCACGTTTTGCAATGGACATCTTCAGATGGATCTCCAAATACGTGGTCAATGTGGAGTTTTGCTCCTGAAGCATGGCAGGGGCAGGAAGTGGGTCTGACCGGGCAGTGGTATTCGGGCCAGTATACCGAACCGGAAGTCTTCCAGGCGCCTGACGGCACATGGGTAATGTACACGCAGGTGGAAATTCTTAGAGGCCAGCCAACTGACACGCCTGGTGTGACTGCCACATCTTTCAACGCAGACCGCATCATGATATTTACAAGCTCGGACTGTAAAAACTGGACGCGATATCAGGCACACGGTGCAATCACCAATGTTAGTTCCCCGGCAATGACGCAGTTCCACCACGAGGAGTTTATGTATGTCCCTTGGGATCCAGATGGGAAAGTTTACTGGCTCTATTTCGGGGTGAATATAAACGGCACCGACACCGGTATATGGCGTATTCGATCAAATAATTATATGTCCTATGACTATGGTTCCAAAGAACAAATCGGAGGATTTTCAGATTATGGGGGTCAGTTAGGTTATCTGTATGAGGCTCCCGGTGGGCCATTATTCACTCGCATTACTATTAGTGCCCCTGACCCAACAGGACGCTATGTCCCGGCTATGCAATATTCGACCAATGGGCTGTGGTGGAGCGGCCTTGTTCATTCTCTGGCAGGATCGACCGACGACGTGTCCAACAAAAGCTGCTTTTTCAACGGGCTCTCAACTATCAACGGCACCGGGAAATGGTACTATATGGGCAATAATCGATGGTCGGCGAAATACGGGTGCTCAACAATGAATGCTGCAGGGGCGCCCGATCTATGGGCTTCGGAAATCGGCATGGGCGACGTGACAATCTCGTTAGACCCATTCACAACTCCTGTCACTTTGCGTACCGGAAATTCGAATGTAACTTCAGTAGCAGTGTTTACCGACGGAACGGTGCGGGTCAACGCCCAAACGAATCTCGCTGGTGCGTGGACTGGTTGGCAAACTATTACCGGCAGCCAATATGTTTCCCACATGGATTCCACGTTGCTCTCCGATGGGCGCATTGCCACTTTCGGAGTGGCAGCAGATACAGCTATATGGATGAATGTACAGAACACCGCTGGTGGCACTTGGAATGGCTGGCAAACATTAGGAGGCGCAGGTTTTTCATACGTACGGTCATTGCGACTCACCAACGATGTGTTGGTCGCATTCGGTTGCGGAAATGGAACAGCCGTTTATGTCAACGCCCAGACCTCCCCGGGGGGAAGTTGGGGAGGGTGGCAGAGCATTGGTGGTTCCGGGTTCAGTCAAATCGATCCACAATTGTTGAGTGACGGCCGACTAGTATGCTTCGGCGTGGGTGATGCCACCACTGCATGGGTGAACGCGCAATCGGCCCCAGGTTCAAGTTGGGTGGGTTGGTCAAGTTTGGGCGGGCCGACATTTTCAAATCTGCGCTCAGTTCTTTATCCCGATGGTCGGCTAGCGGTCTTCGCGGTAGGTCACGGAACTGATGCCTGGGTTGATGCCCAATACTCTGCGGGTGGAACTTGGGGCGGATTCCAAAGCATCGGTGGGAGCGTTTTCACAAGCATTCGACCAATCCTGCTTCCTGATGGTCGATTTACTTGTTTTGGGGTTGGAACTTCAAGCGCAATATTTCAAAATTCCCAAGTTGCGGTGGGAGGTGCTTGGGGCAGCTGGACGTCATTGGGTGGGACAAACCTTTCCACAGTGGACGCAATTCTCTACCCCGATGGGCGTTTAGTCAATTGTGGGAATGCTTATGGAGGAGGGCTTATGTTTAATCTGCAAAATTCACCCAACGGCTCGTGGCTTGGCTATACCGACTTGGGAGGAAAAATAGAGTAA
PROTEIN sequence
Length: 707
MNIRNSVCALVLCQLLVANLAVAQYYGGYNINVSSSAFYGPFSLEYRPTTGGQPAYNYSVHMIRESTGTRFRAFIGGRWKSSLGDGDHVLQWTSSDGSPNTWSMWSFAPEAWQGQEVGLTGQWYSGQYTEPEVFQAPDGTWVMYTQVEILRGQPTDTPGVTATSFNADRIMIFTSSDCKNWTRYQAHGAITNVSSPAMTQFHHEEFMYVPWDPDGKVYWLYFGVNINGTDTGIWRIRSNNYMSYDYGSKEQIGGFSDYGGQLGYLYEAPGGPLFTRITISAPDPTGRYVPAMQYSTNGLWWSGLVHSLAGSTDDVSNKSCFFNGLSTINGTGKWYYMGNNRWSAKYGCSTMNAAGAPDLWASEIGMGDVTISLDPFTTPVTLRTGNSNVTSVAVFTDGTVRVNAQTNLAGAWTGWQTITGSQYVSHMDSTLLSDGRIATFGVAADTAIWMNVQNTAGGTWNGWQTLGGAGFSYVRSLRLTNDVLVAFGCGNGTAVYVNAQTSPGGSWGGWQSIGGSGFSQIDPQLLSDGRLVCFGVGDATTAWVNAQSAPGSSWVGWSSLGGPTFSNLRSVLYPDGRLAVFAVGHGTDAWVDAQYSAGGTWGGFQSIGGSVFTSIRPILLPDGRFTCFGVGTSSAIFQNSQVAVGGAWGSWTSLGGTNLSTVDAILYPDGRLVNCGNAYGGGLMFNLQNSPNGSWLGYTDLGGKIE*