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berkeley_reactor_200306_planktonic_scaffold_89890_38

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 46175..46522

Top 3 Functional Annotations

Value Algorithm Source
ISPsy2, transposase n=10 Tax=Pseudomonas syringae group RepID=S6QQ96_PSESF similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 81.0
  • Bit_score: 57
  • Evalue 1.00e-05
ISPsy2, transposase similarity KEGG
DB: KEGG
  • Identity: 43.2
  • Coverage: 81.0
  • Bit_score: 57
  • Evalue 2.80e-06
Transposase, IS4 family {ECO:0000313|EMBL:AAY35170.1}; TaxID=205918 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. syringae (strain B728a).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.2
  • Coverage: 81.0
  • Bit_score: 57
  • Evalue 1.40e-05

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Taxonomy

Pseudomonas syringae → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 348
ATGATCGGCCAGGATGGCGCGCGCCAGTTGTGCCGGCCCGCTGCCGCAATAACCCCACCCAAACCCGGTCGGACTGTGGTTCCACAGATACAACCGGGGATTCAAGCGGCGCCCAACGTGGCGGACATCATCAAGCCCGCCGAACTGCTGCACGGACAGGAGCAGCAAGTCCACGCCGAAGCCGGCTACACCGGGGTGGAGAAACGAGCCGAGATCGTGGCCTTGGAACGGAAGATCGCCTGGCTGATGCCTGCAAACGCGGACAGATCAACGCCAGAGTTGCAGGTGCAGAGAAAGCAACCCTTAAGGCAGCCAAAAAAAACAAAGCTTCAGTGCGGCGTTTGTTGA
PROTEIN sequence
Length: 116
MIGQDGARQLCRPAAAITPPKPGRTVVPQIQPGIQAAPNVADIIKPAELLHGQEQQVHAEAGYTGVEKRAEIVALERKIAWLMPANADRSTPELQVQRKQPLRQPKKTKLQCGVC*