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berkeley_reactor_200306_planktonic_scaffold_89890_49

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 55944..56624

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator n=1 Tax=Rudanella lutea RepID=UPI00037F32E0 similarity UNIREF
DB: UNIREF100
  • Identity: 45.0
  • Coverage: 209.0
  • Bit_score: 196
  • Evalue 1.60e-47
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.5
  • Coverage: 209.0
  • Bit_score: 189
  • Evalue 5.50e-46
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADB36681.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 209.0
  • Bit_score: 189
  • Evalue 2.70e-45

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Taxonomy

Spirosoma linguale → Spirosoma → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGGAAGAAAGAACACAGGCGGAATTGGCATACAAAGAGCTGAGTCACCGCATCCTAATCCAGGAAATAGCGCCCAACGAGCGCATCAAGGAACAGTTCTGGGCGCAACAGTTGAAGGTGAATCGGGCAGCCATCCGGGAGAGCCTGACTCGACTCTTCGGCGAGGGTGTGGTGCGACAAGGTGAGCGCGGTGGGTATTTCGTCAGTGAAATGACCGAACAGGAAATTCACGAAATTCGCGAACTGAGGGAAATCTTGGAAAGTGCCGCCTTCGTTCTCGCTTGTAACCGGGCTACTGCTAAACAGATTAAGGAAATTGAAGAAACCTGTGATGACCTCGCTAATTTCATTCGTAAGGGCTATTTCACTGGTGCCCACGAAGCGGACCTGCGTTTTCACCAGCTATTGATTGTAGCCTCACGAAACGAACGTCTGGTGCAACTGTATCAACGTTCGCACATTCCGCTTTTTCAAAGAAGAGCAGCCCAAACTAGGTTTCATGTTGATGATTTTATCCAGACGGAAAAGGAACACCGAAAAATTGTGGAGGCGCTTAAGCGGAAAGACAAAAAAGCTGGATCGCAATTCTTGAAAATGCATTTTAATCGCGGCGAAAAAGAAGCCTTGGCGTCGCCGGTGAGCGAATCCGACGGCAGCGCGCTGGCTACACCAATTTCTTAA
PROTEIN sequence
Length: 227
MEERTQAELAYKELSHRILIQEIAPNERIKEQFWAQQLKVNRAAIRESLTRLFGEGVVRQGERGGYFVSEMTEQEIHEIRELREILESAAFVLACNRATAKQIKEIEETCDDLANFIRKGYFTGAHEADLRFHQLLIVASRNERLVQLYQRSHIPLFQRRAAQTRFHVDDFIQTEKEHRKIVEALKRKDKKAGSQFLKMHFNRGEKEALASPVSESDGSALATPIS*