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berkeley_reactor_200306_planktonic_scaffold_89890_56

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(68182..68859)

Top 3 Functional Annotations

Value Algorithm Source
Transposase, IS4 family n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JD53_BURVG similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 221.0
  • Bit_score: 278
  • Evalue 3.20e-72
Transposase DDE domain protein {ECO:0000313|EMBL:EXI65803.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.7
  • Coverage: 221.0
  • Bit_score: 288
  • Evalue 7.40e-75
transposase, IS4 family protein similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 221.0
  • Bit_score: 278
  • Evalue 9.00e-73

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Taxonomy

Candidatus Accumulibacter sp. SK-12 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
GTGCCCGACGCCACCACACTCTTGAACTTCCGTCATCTGCTTGAGACGCATGACCTGTGCAAGGGCCTCTTCACCGCGATCAATGCCGACCTGACCACGCGCGGCCTGCTGCTGCGCGAAGGCACACTGGTGGACGCCACGCTCATTGCCGCGCCGCCCTCGACCAAGAATGCGAAGCGGGAACGCGACCCTGAAATGCACCAGACCAGGAAAGGCAACCAATGGTATTTCGGGATGAAAGCGCACATTGGCGCGGACCGGGACAGCAAGCTGGTGCATACCGTGGTCGTCAGTGCGGCGAACGTGGCCGACGTTACGAAGACGACGGAACTGCTGCACGGCCAGGAGACGCAAGTCCATGCCGATGCCGGTTACACCGGGGTGGAGAAGCGGGCGGAGATCGTGGCGCTGGAACGGAATATCGACTGGCAGATTGCGAGCAAGCGCGGGGTGATCAAAGCTCTGGCCGAAGGCGCGAAGAAAGCGGCACGCCAGGCGGTGGAGAAGGCGAAGGCCTCCGTGCGGGCGTTCGTGGAGCACCCCTTCCACATCGTGAAGAACCTGTTTGGGCATCGGAAAGTGAGGTATCGCGGGCTGGCGAAAAACGGCCATCAACTCTACACGCTTTTTGGCCTGGCCAATGTGGTGATCGCTGCGCGGACGCGAGCCACGGCGTGA
PROTEIN sequence
Length: 226
VPDATTLLNFRHLLETHDLCKGLFTAINADLTTRGLLLREGTLVDATLIAAPPSTKNAKRERDPEMHQTRKGNQWYFGMKAHIGADRDSKLVHTVVVSAANVADVTKTTELLHGQETQVHADAGYTGVEKRAEIVALERNIDWQIASKRGVIKALAEGAKKAARQAVEKAKASVRAFVEHPFHIVKNLFGHRKVRYRGLAKNGHQLYTLFGLANVVIAARTRATA*