ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_89890_58

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(69268..70050)

Top 3 Functional Annotations

Value Algorithm Source
Transposase IS4 family protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TEI9_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 256.0
  • Bit_score: 253
  • Evalue 1.30e-64
Transposase IS4 family protein {ECO:0000313|EMBL:EFH90362.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 256.0
  • Bit_score: 253
  • Evalue 1.80e-64
transposase similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 261.0
  • Bit_score: 247
  • Evalue 3.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 783
ATGAAAATCGCTACTTACGACACCGACCTCACCCACGACCAATGGCACCTGATTCGCCGTTTCCTGCCCGCCGCCAAAAAACGCGGACGCCCACGCACCGCTCTGCGCGACGTGATCAACGCCATCCTCTATCTGGTCAAGACCGGGGCCCAATGGCGGCTCCTACCCAAAAACTTTCCGCCCTGGCAGACGGTCTATCATCATTTCCGCCAATGGACCCGCAATGGTCTGCTGGCCCGGCTCAATGACCGCCTCCGCGCCAAGGTGCGGCAGGCCGTGGGCAAACACGCCCAACCCACCGCCGCCAGTCTCGACAGCCAAACCGTGCGCGCCAGCGCCCACCGCGGCTCCGTCGGCTACGATGCCGCCAAGAAAACCAAGGGCCGCAAGCGTTTCCTGCTCGTGGACACGCTGGGACTGCTGCTGGGCGTCACCCTCGAACCGGCCAACTGCCCCGAACGCCAAGGCGCCCGCGCCCTGCTGGCCGACGTCCTGATGGACTTTCCCGACCTGCGCAAACTGTGGGTGGACGGTGGTTTCAATGGCCCAGAGTTTGCCGCCTGGGTGCAGACCCAACACCCCAAACTGGTGGTGGAAGTCGTGAAGCGTCTCGCGGAGACACCCGGCTTCCATGTGTTGCCCAAACGCTGGGTGGTTGAACGCACCTTCGGCTGGCTCATGCACTGTCGCCGCTTGGTGCGCGATCACGAACAGACGACCGCCTCCGCCGCCGGCTGGATTTACCTCGCCATCATCCGCCTCATGCTCCGCAGACTCGCATAA
PROTEIN sequence
Length: 261
MKIATYDTDLTHDQWHLIRRFLPAAKKRGRPRTALRDVINAILYLVKTGAQWRLLPKNFPPWQTVYHHFRQWTRNGLLARLNDRLRAKVRQAVGKHAQPTAASLDSQTVRASAHRGSVGYDAAKKTKGRKRFLLVDTLGLLLGVTLEPANCPERQGARALLADVLMDFPDLRKLWVDGGFNGPEFAAWVQTQHPKLVVEVVKRLAETPGFHVLPKRWVVERTFGWLMHCRRLVRDHEQTTASAAGWIYLAIIRLMLRRLA*