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berkeley_reactor_200306_planktonic_scaffold_89890_120

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(149212..150618)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase id=1750053 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 33.4
  • Coverage: 455.0
  • Bit_score: 260
  • Evalue 3.20e-66
O-antigen polymerase similarity KEGG
DB: KEGG
  • Identity: 32.3
  • Coverage: 443.0
  • Bit_score: 234
  • Evalue 4.10e-59
Tax=RBG_16_RIF03_38_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 464.0
  • Bit_score: 337
  • Evalue 1.70e-89

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Taxonomy

RBG_16_RIF03_38_10_curated → RIF03 → Bacteria

Sequences

DNA sequence
Length: 1407
ATGCCTCCCATAATCGCACTCGTTCTCTGCCTGATTTTCGTGGCTGGACTTCTCTGGATGGAGTGTCAGCGGTCCGGGAAGCAGTCCTGGGATGTCTGGCTGCCAACGCTTTGGATTCTATACTGTGGATCCAGGCCGGTTGGCTACTGGCTGGGACCCGGCGCAGTTTTTGAAGACGGGGATTTTAGTGTGCAGGCCGGAAGCCCGGTTGAGCGGATCGTATTGTCGCTGATGATCCTGGCGGCTTTAATAATCCTGATTAACAGGAGGATCAATTGGAGCGAGGTGTTCCAAGCCAATCGCTGGCTGATCATCCTGTTTGCATACATGCTCGTGAGCATTCTTTGGTCGGATTTTCCATTCGTATCCTTCAAACGATGGGTGAAGGCAAGTGGCACGCTGCTCATCGCTCTGGTCGTGCTGACCGGGGCCGGCCCACGCGAAATCTTGCAATCGGTTTTCATCAAGACGGCCTACATCCTGGTGCCGGTTTCCGTCCTGTTGGTGAAATATTTTCAAGGGTATGGCGTGACTTACAACCAATGGTCGCACACCCCCATGTGGCAGGGGGCAACCCTCACAAAGAACACCTTGGGCGTCCTGTGTTTGATCTCCATTTTATTTCTCATCTGGTCCATGATTCGACGGAGGCGGGGAACGGAGCCGCCGGTGGGAAAGATTGCCTGGTGGGGGGATTTGCTGGTGATTGCGATGGCGCTTTGGCTGCTGCGAGGTCCGGGGGGAGCTTATAGCGCCAGTTCCGTCGGGGCACTGTTCCTGGGGGCGCTTGCGCTGGTTGTTCTCTATCGTGCCGAGGGAGTGGAGCGGTATTTGAACCGCCTGGTTGTGTTGGGTCTCGGAGGGATCGGATTGGTCGTTCTGCTCGGCAATTTATTGGAATTCTCACCCCTCGCGCTCGCCACATCGTTGTTGGGGAGGGATGCGACGCTGACCGGGCGGACCGAAGAAATCTGGGCACCTCTGCTCAAAATCGCGTCGGGACATCCGATTTTTGGACTGGGATTTGGCGGTTTTTGGGTGCGACAATTTCCGGGGCAGGTGAACGAGGCGCACAATGGTTATCTGGATGTTTTTTTGCAGTTGGGAGTGGTGGGCATTGTATTACTAATGGTGGTTGTGGTGTCCTTCTACCGAAGGGCCAGGGAGGAATTCAACGCGGACAAAGACTGGGGGGCGCTTCGGCTTGCCATTCTGATCATCGCGGTGGCGCACAATTTCACCGAAACCTCCTGGCTCGGGGACACGATGCTCCTATGGAATGTGTTTGTCTGCCTGGCGATGGTTTATCCCCCGGTGGAGATGAACGAGACAGTTGTCGAAAGGGTGGAGGCCAAGCCGCGCCCAGCGGAGAGTTGCAAGGAAACTGCATGTCCGGCTGATGCTTGA
PROTEIN sequence
Length: 469
MPPIIALVLCLIFVAGLLWMECQRSGKQSWDVWLPTLWILYCGSRPVGYWLGPGAVFEDGDFSVQAGSPVERIVLSLMILAALIILINRRINWSEVFQANRWLIILFAYMLVSILWSDFPFVSFKRWVKASGTLLIALVVLTGAGPREILQSVFIKTAYILVPVSVLLVKYFQGYGVTYNQWSHTPMWQGATLTKNTLGVLCLISILFLIWSMIRRRRGTEPPVGKIAWWGDLLVIAMALWLLRGPGGAYSASSVGALFLGALALVVLYRAEGVERYLNRLVVLGLGGIGLVVLLGNLLEFSPLALATSLLGRDATLTGRTEEIWAPLLKIASGHPIFGLGFGGFWVRQFPGQVNEAHNGYLDVFLQLGVVGIVLLMVVVVSFYRRAREEFNADKDWGALRLAILIIAVAHNFTETSWLGDTMLLWNVFVCLAMVYPPVEMNETVVERVEAKPRPAESCKETACPADA*