ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_89890_137

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 170631..171173

Top 3 Functional Annotations

Value Algorithm Source
Fibronectin type III domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD54_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 181.0
  • Bit_score: 80
  • Evalue 1.70e-12
Fibronectin type III domain protein {ECO:0000313|EMBL:KKS34983.1}; TaxID=1618926 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_42_12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 157.0
  • Bit_score: 87
  • Evalue 2.00e-14
Di-glucose-binding within endoplasmic reticulum similarity KEGG
DB: KEGG
  • Identity: 34.0
  • Coverage: 150.0
  • Bit_score: 79
  • Evalue 1.10e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Parcubacteria bacterium GW2011_GWC2_42_12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAATATCTGCTCAACCATAACCAGCTTGTTGTCCTCATTGCCATCACTGCCAGCCTTTGGTTGGCGGGCGAAATTGCGCCGGCCCAGGCCACGCAGAGCGCGGAAGTTTCCTGGCAGCCAAGCCCCAGCATCAACGCGGTTGGCTATCGCATTTATTATGGAACGGCGAGCGGGGTTTACACGAATTTTATTACCGTCGGCAACGTCACCAATGTTCTGGTGTCCGGCCTGGCCGATGCCACCACCTATTATTTTGCCGGCCGCGCGGTGGACGCCGACGGGTTTGAAAGCAGCCTGTCTCCCGAAGCCACTTATGCGGTCCCCTCGGCCTCCGCCACGCTTGCCGCCCCGGCCGCCGCCGCCGGCAGCTTCTCTTTTACGGTAAGTGGTGTTTCAGGATATAGTTATGTGGTTGAAGCCTCGATCAATCTGCTGGATTGGATTCCCGTGTTCACGAACATCGCCCCGTTCACTTTTCAAGATCCTCAATCCGGCCGGCCCGGCTCAAGATTCTATCGCTCGATTTATTACCAGCCTTGA
PROTEIN sequence
Length: 181
MKYLLNHNQLVVLIAITASLWLAGEIAPAQATQSAEVSWQPSPSINAVGYRIYYGTASGVYTNFITVGNVTNVLVSGLADATTYYFAGRAVDADGFESSLSPEATYAVPSASATLAAPAAAAGSFSFTVSGVSGYSYVVEASINLLDWIPVFTNIAPFTFQDPQSGRPGSRFYRSIYYQP*