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berkeley_reactor_200306_planktonic_scaffold_158606_13

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(16357..17145)

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor Ts n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XRC6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 262.0
  • Bit_score: 378
  • Evalue 3.40e-102
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 262.0
  • Bit_score: 378
  • Evalue 4.80e-102
tsf; elongation factor Ts similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 266.0
  • Bit_score: 214
  • Evalue 2.40e-53

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 789
ATGATGGACTGCAAAAAGGCCCTCGTGGAAGCGCAGGGGAACATTGACACCGCGGTGGATATTCTCCGCAAATCCGGTGCCGCCAGCGCCGCCAAGAAGGCGACCCGTGCCGCGAACGAAGGCGTCATTGCCCAATACGTCGCGCCCGGTGGAAAATCCGGCCTGCTGCTCGAAGTGAACTGCGAAACCGATTTCGTGGCGCGCAACGAGGCGTTTCGCAACTTCGCGGATGAGCTCGCCAGGAAGGTCGCGCTAGATCCCAACGCGAATCTGGAGGCCGACCGCGAAGCCGCCGTCAGCAAGATGGGCGAAAACATCAAGATCGCCCGCAATGCCCGGCTCGAAGTCGCCGGCAGCGGTCTCGTGGCGGCTTACATTCACACCGGCGCCAAGGTCGGCGTGCTGGTGGAAATCGGCTGCGGCAAGACCGAAACCGAGGGCAAGGATGAATTCAAGCAACTGGTCAAGGACATCACCCTCCAGATTGCCGCCGGATTCCCGCACGTGGTTTCCCGCGAGGAAATCGCGCCGGAAGTCATCGCCAAGGAGCGCGAGATCGCCGCGCAATCCGATCGTTTGAAAGGCAAGCCCGCCGCCGCCATGGAGAAGATTCTGGCCGGCGTTTTGGAGAAATTCTTCCAAGGCTATTGCCTCGTGGACCAGGGCTTCGTGAAGCGCAATTCCGAGGTCAGCGTCAAGGAACACGTCGGACAAATCGCGAAACAACTGGGCGATGAAATCACCATCCGCCGCTTTGTCCGCTTTCAAGTCGGCGAAACCGCGGCCTGA
PROTEIN sequence
Length: 263
MMDCKKALVEAQGNIDTAVDILRKSGAASAAKKATRAANEGVIAQYVAPGGKSGLLLEVNCETDFVARNEAFRNFADELARKVALDPNANLEADREAAVSKMGENIKIARNARLEVAGSGLVAAYIHTGAKVGVLVEIGCGKTETEGKDEFKQLVKDITLQIAAGFPHVVSREEIAPEVIAKEREIAAQSDRLKGKPAAAMEKILAGVLEKFFQGYCLVDQGFVKRNSEVSVKEHVGQIAKQLGDEITIRRFVRFQVGETAA*