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berkeley_reactor_200306_planktonic_scaffold_158606_22

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(26583..28514)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI000303E8F1 similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 105.0
  • Bit_score: 83
  • Evalue 5.60e-13
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 25.4
  • Coverage: 560.0
  • Bit_score: 81
  • Evalue 6.00e-13
Uncharacterized protein {ECO:0000313|EMBL:ACM35405.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.4
  • Coverage: 560.0
  • Bit_score: 81
  • Evalue 3.00e-12

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Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1932
ATGAAATACTCGAAATCCCTAAAAATGCTGATGTGCCTGACACTTACTCTGGCCCTGGCGCTGGATGCCACCGCGGCCGGCAAGGGGAGCGGTTACATGGGCGGCGGCGGAACAATGACGGGCGGTCCAAGAGGTGGTGGTGGAACTGGAGATGGAACGGGAACGGGAACGGGTGACAGCACCGGAACAGGAAGCGAGGGTGGAACCGCGGGTGGCGGCTCACAGTCGGGCGGTGGCTCAGGGCCGACTGGTGATCAAGGATCCATCCAAGGGAAACTTTACGGTGACCTGTATGTCATTCTCCGCTACCAAGGCGGGGAGACGAAACGCGTGCCCAAAGTGGATGCCAGCGGCAACCCGGTTCTGGTGCCCACACCGTGGACGGATCCCGACGGCAATCTGCACACCGTCAAGCAGCAGGATTGGGTGACGGCCACCGCGATTGGTGGCGAGCCGGTCCTGACGGAAAACTTCGTTGCCTATCAGGTGGTGGCTGAAGACACTGGACAACTTGAAATCTGTCCGGAAACCGGAAACTACTGGTGGCCGGCTCCGACTCCCAGCCAGTGCGTGCAACCGGTCGCCGACTTCAATCGCTGGGGGAATCTGAGCAGCGACGTCAACGCCAATCACCCGTATCATTCGGTGCTGGAGAAAGTCCGGTTCAACACCATCCCATTGGTCATGACTTACGATCCCACCTGGGATCGGACGGAATTTACCGTGGGCGTCTTGAAGGCGGACGGCACCGCCGATCCCTACTTCATTCAACCGGGAGGAATATGGACGGATCCGGCGAACAACCTGGTCACTTACACCAATGGAGTGTTGTGGACGGATCTTATTCAAGAGGTCAGTTTCGGACGTTTGAACCAGGCACGCGCCACCGAAGCCGTCCTGCAGGCGGCATTCGATGAAGCCATCACTTCCATCAACCTGGCGCTGGCAGTCCGGGTTGATCCGTCCGGGCGATTGCTGCTCCGACAATACGTTTATGATCCCTACCGGGTTGATCCCGCCACGGGCAATCCGCTCATCATCGGCGAAACAGACAAGCCGATTGATTCTCCCTTGGAGAACCTGGCGATCTATCTGAAACTGATGCGGGACGGCCATCTCGTGACGCCCGGTGACCAGCGCAGCACCATTGATCGTTCCACAAAAGGCGGCATTCCGCTGGATCAGTTGCTCGGCCTTGAAGATGGGCCGTCCACGGAACTTCGTCCGACGGTGAATATCCAAAAACTCAGGGACTGGGGGCTGGGCTATCTGGTGGATGTCCGCGAAGAACTCTATTACACGTATTATGACGCCAACCACGTCCTGCAATCCACGACCTCGCTCCCGGGCGCCGGGGTGGCATACCAGACGTGGGTGGGCATTCACACGGCGGATGGATCGGTGCCGGCCGGAGCCGACTTTGAAACCAGCGCCGCCGCGCTCTCCGCCGCGGCCGATAAAGGCAGCATCCTCTCGGTGGACCATGTCGTTTATCTCAATTCCATCCTTGGCCTCAACAAGGTGGTTGGCTCGGTCACCAATGCCAACGGCACGGTGACAGATTATGTTAAGACGCCGCAGTATTTCAATTATGCGGCGGCGCCGCTCTATGACCGGACAGCGGTCTTCGCTGATCGGGGATATTTTCCCGCCGACGCTGAACCCGCACCCGGCGGCGATCCCGTCACGGGAAAAGTCCTGATTCTGGCGGCTCCCGCAGGGGATGGCGGCGATCCGATGCCCGGCGTTTGGGTGGAATACGCGGCCCCCATACTCAGTTATGTGCCGTTTCGCGCCTTGGGCGTGGACGATCAGGGGTTCCCCAATAATACGATCGCAACGCGCGACATCGCCGGGTTTGCGCAGGGTGCCGATGACAACTTGCATCTCATTGGCTTCGTGCATACCTACCAGATTCCCGCGAACCGGTGA
PROTEIN sequence
Length: 644
MKYSKSLKMLMCLTLTLALALDATAAGKGSGYMGGGGTMTGGPRGGGGTGDGTGTGTGDSTGTGSEGGTAGGGSQSGGGSGPTGDQGSIQGKLYGDLYVILRYQGGETKRVPKVDASGNPVLVPTPWTDPDGNLHTVKQQDWVTATAIGGEPVLTENFVAYQVVAEDTGQLEICPETGNYWWPAPTPSQCVQPVADFNRWGNLSSDVNANHPYHSVLEKVRFNTIPLVMTYDPTWDRTEFTVGVLKADGTADPYFIQPGGIWTDPANNLVTYTNGVLWTDLIQEVSFGRLNQARATEAVLQAAFDEAITSINLALAVRVDPSGRLLLRQYVYDPYRVDPATGNPLIIGETDKPIDSPLENLAIYLKLMRDGHLVTPGDQRSTIDRSTKGGIPLDQLLGLEDGPSTELRPTVNIQKLRDWGLGYLVDVREELYYTYYDANHVLQSTTSLPGAGVAYQTWVGIHTADGSVPAGADFETSAAALSAAADKGSILSVDHVVYLNSILGLNKVVGSVTNANGTVTDYVKTPQYFNYAAAPLYDRTAVFADRGYFPADAEPAPGGDPVTGKVLILAAPAGDGGDPMPGVWVEYAAPILSYVPFRALGVDDQGFPNNTIATRDIAGFAQGADDNLHLIGFVHTYQIPANR*