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berkeley_reactor_200306_planktonic_scaffold_158606_85

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(103067..104929)

Top 3 Functional Annotations

Value Algorithm Source
Efflux transporter, RND family, MFP subunit id=3377413 bin=GWF2_Lentisphaerae_50_93 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 63.2
  • Coverage: 619.0
  • Bit_score: 767
  • Evalue 8.10e-219
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 47.5
  • Coverage: 491.0
  • Bit_score: 434
  • Evalue 3.50e-119
Tax=GWF2_Lentisphaerae_50_93_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 63.2
  • Coverage: 619.0
  • Bit_score: 767
  • Evalue 1.10e-218

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Taxonomy

GWF2_Lentisphaerae_50_93_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 1863
ATGATAAATGCCATGAAACCCAAATTAAAAATCGCAGCACTGTTTCTAATACTGACGGCCATCGTCGGCGCGGGAGTTTTCGTCGCCGGCTGTTCCAAGGCACCCGATAAAACCGCCGATACCGCTGCTTCGGGGAGCAAGACGCTTTATACCTGCGGGATGCACCCGTGGATTATTCAGGATCATCCAGGCAACTGTCCGATCTGCGGCATGAAACTGGAGGCGGTTCACAAAAATGCGACCGCCGGATCGGCAGCGGGCGATCACAAAATCCTTTATTACAAATCCACGATGAAGGCGGGCGAAACAAGCCCGGTGCCGGCCAAGGACAGCATGGGCATGGACATGGTGCCGGTCTATGCGGGTGGGGACACCGAATCTACCGCCATCGCAGTTGATCCCCAGACAATCCAGACGATGAACATCCAGACGACGGAAATCACGCGCGGCCCGCTGCGCCGGACCATCCGCACAGTCGGCACGATTGATTACAATGAAACGACGCTCGCGGACGTGACCACCAAGTTCAAGGGCTGGATCGAGAAGCTGGACGTGGACGCCACCGGCCAGTTGGTGCATCGCGGCGAGCCGCTGTTCGCCATTTATTCGCCGGATCTTTACAGTGCGGAAGTTGAATACCTGCTCACGCTGAATCAAAGTTCCACCAACGACCCCGGCGCGGCGGTGCTTCGCGAGTCGGCGGCGAACAAGCTGAAATTCTACGACATCTCCGAAGCGCAGGTCGCGGATCTGGACAAAACCGGCAAGCCTCGCAAGACGTTGCAAATTCTCGCGCCGATTGACGGCTTTGTGATTCAGAAAAATGTCGTGGAAGGCCAGATGGTGGATGCCGGCATGAAACTCTATCAACTTGCCGACCTGGGCATTGTCTGGGTTTATGCGCAGGTTTATGAACAGGATTTACCCTACATCCGGCTTGGGCAGGAGGCGGTGGTTAAAATATCGTCGCTGCCGGACCGCGAATTTCGCGGACGCGTGACCTATGTTTATCCGAACGTGGACGAAAAAACGCGCACGGCGCGCGTGCGGCTGGAGTTTGAAAATCCTGGTTATTTTCTGAAACCCGGCATGTTCGTTTCGGTGAAAATCATTTCCGAACTGGCACCGTCCGCGCTGCTGGTGCCGGATTCGGCCGTGCTGCGCAGCGGCGAAAAGAACACTGTTTTTGTTGCTCTGCCTGGCGGCAAGTTTGATCCGCGCACAGTCGAGCTCGGTCCCCAGGCGGAGAACGACATGTATCAAGTCATCAGTGGTTTGCGGGATGGCGAACGCGTGGTCACCTCCGGCCAGTTCATGCTTGATTCAGAAAGTCAGTTGCGCGAGGCGATTCAAAAAATGCGCGGGCCAAAGGGTGCCGATGTGAACACGCCGGCAACCGCGAGCATGAGCAACATGGAACCGGCCACATCCACCAACATGGTGAAGGAAGGCATGATCTATGTCTGTCCGATGCCGGCGCACGTTTCCATCACCTATGACCATCCGGGGAACTGCCCGATTTGCGGCATGGCACTGGTGCCGGTGACGCCGAAAGAACTCAAGCAACTCCAACCGGGCGGCAAGGTGCTTTACTACACCTGTCCGATGCCCGAACACAGCAGCGTGCATGAGGACAAGCCCGGCAAATGCCCGATCTGCGGCATGACGCTGATTCCAGTAATGTCGGCACCGGATGTCATCACTAATTCAGTGCCACCCGAAACCAAATCTTCGTCCGCCACAAACTCGGCGGCTGAACAACTCTACACCTGCCCGATGCACCCCGAAGTGATTTCCGACAAACCGGGCAAGTGTCCGATTTGCGAAATGAACTTGGTGCCGGTGAAAACCCCCGTGAGATAA
PROTEIN sequence
Length: 621
MINAMKPKLKIAALFLILTAIVGAGVFVAGCSKAPDKTADTAASGSKTLYTCGMHPWIIQDHPGNCPICGMKLEAVHKNATAGSAAGDHKILYYKSTMKAGETSPVPAKDSMGMDMVPVYAGGDTESTAIAVDPQTIQTMNIQTTEITRGPLRRTIRTVGTIDYNETTLADVTTKFKGWIEKLDVDATGQLVHRGEPLFAIYSPDLYSAEVEYLLTLNQSSTNDPGAAVLRESAANKLKFYDISEAQVADLDKTGKPRKTLQILAPIDGFVIQKNVVEGQMVDAGMKLYQLADLGIVWVYAQVYEQDLPYIRLGQEAVVKISSLPDREFRGRVTYVYPNVDEKTRTARVRLEFENPGYFLKPGMFVSVKIISELAPSALLVPDSAVLRSGEKNTVFVALPGGKFDPRTVELGPQAENDMYQVISGLRDGERVVTSGQFMLDSESQLREAIQKMRGPKGADVNTPATASMSNMEPATSTNMVKEGMIYVCPMPAHVSITYDHPGNCPICGMALVPVTPKELKQLQPGGKVLYYTCPMPEHSSVHEDKPGKCPICGMTLIPVMSAPDVITNSVPPETKSSSATNSAAEQLYTCPMHPEVISDKPGKCPICEMNLVPVKTPVR*