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berkeley_reactor_200306_planktonic_scaffold_158606_96

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 112354..112944

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=uncultured Acidobacteria bacterium A11 RepID=F8TTK1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 168
  • Evalue 5.30e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1036854 species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium A11.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 183.0
  • Bit_score: 168
  • Evalue 7.40e-39
RNA polymerase subunit sigma-24 similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 196.0
  • Bit_score: 162
  • Evalue 6.30e-38

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Taxonomy

uncultured Acidobacteria bacterium A11 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 591
ATGAGCAGCAGCATTGAGGCCGACGCCCGCGACCGGGCGGACATGGAAAAACTGCAAGCCGGCCATGACGCCGCGCTCAATGATTTGATGGAGCGCCATGCCGAACCGATCTTTCACTTTTTCTGTCGGATGACCGGCGATGTGGAGGACGCGAATGATCTCGCACAGGAAACCTTCGTTCGCATTTTCAAAGCACGCGACACCTTTCGCACGGAACACAAATTCTCGACTTGGCTGTTCACCATTGCCGCGAATCTGGCGCGGAACCGATTCCGCTGGCGCAGCCGCCATCCAAATGTTTCTTTGGAAACTGAAGATGCAGAAACCGAGCAATCCCTCGGTAGCACGTTGGCGGCAAACTCACCGGCACCCAATGAAGCAGCTCTCGCCAGCGAACGCGCCGAAGCGGTGCGCGTGGCCGTGAATAATCTGCCGGAAGATTTGCGCGAGGCGATTGTGCTGTGTGAATGGGAGGAACACAGTGTTGCCGAAGCCGCGAAGATTTTGGAAACGACGCCAAAAGCGGTGGAATCCAGGCTTTACCGCGCCCGGCAGATTTTGCGCGAACGGTTGAAAAGCTGGTTGAACTAA
PROTEIN sequence
Length: 197
MSSSIEADARDRADMEKLQAGHDAALNDLMERHAEPIFHFFCRMTGDVEDANDLAQETFVRIFKARDTFRTEHKFSTWLFTIAANLARNRFRWRSRHPNVSLETEDAETEQSLGSTLAANSPAPNEAALASERAEAVRVAVNNLPEDLREAIVLCEWEEHSVAEAAKILETTPKAVESRLYRARQILRERLKSWLN*