ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_158606_98

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 114702..115526

Top 3 Functional Annotations

Value Algorithm Source
NERD domain protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSN7_DESBD similarity UNIREF
DB: UNIREF100
  • Identity: 29.4
  • Coverage: 180.0
  • Bit_score: 78
  • Evalue 1.00e-11
NERD domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 29.4
  • Coverage: 180.0
  • Bit_score: 78
  • Evalue 2.80e-12
Tax=RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 32.0
  • Coverage: 153.0
  • Bit_score: 79
  • Evalue 6.30e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYB2_FULL_Deltaproteobacteria_66_7_curated → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 825
ATGGCGAAAATTCTTGGTGAATCCGGCAGATACGTCAGTGATGAAGCCGTCCGGCAAAGACGGAAGATCCTCATTACGGTGATGGTCATCATCGCGCTGCTGGGTGTGATTGAGGGCATTGTTCTTTCGACATTTTTCCCGTTGGGCTGGCTTACACCCATAGGCAAGGCGTCAATTTTGCTGATCGCTCTGTCTGGAATTTGGGCTTTGGACAAATGGGGTGACCGAAAGCTCAACGCCATCGAAAAAAGGAAAAACAACATGGTGCGGGGGGCTGCCGGTGAAATCCAGGTGGGCAGTGGACTCAACAAGCTGCCCGATGATTATTGCGTCATCAACGATGTTGCTACGCCGCATGGCAACCTTGACCACGTCGTCGTTGGTCCCACGGGCGTGTTTGTGCTCGATACCAAAGCCTGGCGTGGGATTGTGACATCGGATGGAAAAGGTGAACTCCTGCTAAACGGTCAACCGACGGACAAGGCATACGTCCGTCAGTTTGTCGGCCGGATGATGAGCGTCAGGGAAAGGGTTCTCACACTGGCCGCCGGACTGGACACTCGCTTTAACGCCGTTTTTGTTTTCACGGCAGCGCGAGTTGAAGCGAAATGGGGCACCACCGGGAAACTGCATTGCATCACCGACGACCAAATCTTTGACTACATCGCGGAAAAAGATTTTGGAAAAAAATTAAAAGCCGAGGAAATCAGCCAGATCGCCCAGGCCTTTCTTGGTCTGGCGCACATGGATAAGGAATTCGGTCGGGAGGCTAAAGTGCAGCCCCAAGCCAGCCGAGCCAACTTGCAACCAGCCAGTGCTAATTGA
PROTEIN sequence
Length: 275
MAKILGESGRYVSDEAVRQRRKILITVMVIIALLGVIEGIVLSTFFPLGWLTPIGKASILLIALSGIWALDKWGDRKLNAIEKRKNNMVRGAAGEIQVGSGLNKLPDDYCVINDVATPHGNLDHVVVGPTGVFVLDTKAWRGIVTSDGKGELLLNGQPTDKAYVRQFVGRMMSVRERVLTLAAGLDTRFNAVFVFTAARVEAKWGTTGKLHCITDDQIFDYIAEKDFGKKLKAEEISQIAQAFLGLAHMDKEFGREAKVQPQASRANLQPASAN*