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berkeley_reactor_200306_planktonic_scaffold_158606_104

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(120599..123016)

Top 3 Functional Annotations

Value Algorithm Source
Helicase UvrD n=1 Tax=Pseudomonas chloritidismutans AW-1 RepID=V4QHA0_PSECO similarity UNIREF
DB: UNIREF100
  • Identity: 28.3
  • Coverage: 696.0
  • Bit_score: 203
  • Evalue 7.90e-49
Helicase UvrD {ECO:0000313|EMBL:EQL43543.1}; TaxID=1350465 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA03.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.4
  • Coverage: 689.0
  • Bit_score: 203
  • Evalue 1.10e-48
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 27.4
  • Coverage: 698.0
  • Bit_score: 200
  • Evalue 1.50e-48

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2418
ATGAGTGAACCTGCAAATCCATCTCGGACCATCGCCGAGTTTATTCTTGGCGAGCTGGACCATTTCAAAAAAACTTTCCGACCGCACGGCGGCAACCTGACGTTTCACGGCCAGACCCAACTCACCCATGAGCCGTTCGTCGGTTACGCCAGGGTGACAGACAAGAAGAATGTCGAAACCAAGCTCCTGATTTGCCGCCACTATACGCCGCTCAATTTTCATGCCCGCAATGGAAATGTTGATTTTGCCAGCTATCTTTCGCCGTTGGGGCGCGTCGTGGCCAAACGTCCCGGCCAGGACCACAAGTTTCAGATAAAGACCCGCGCCGGCAATATATTGGAAGACCACCATTTTCAGCTAATTGAGAAGGATGAATTTACCCTGCATCTGGATGGCGGGGCTTGGGATGCCGTCAACAATCAGATTTCATGGATTGATGGCCGGCTGCTGGCACGGTCGCTGCGGCAACTTCTGGCGGGCAAGCCGGAGGAAAAACAAATCCGCCAGTTGCGCTATTCGGTTCAGTTGCCCGATCAGGCAATTTTGGATCTGGCCCAGGACGAGATTTTTCGTCTGCCGCTGCGGGCGCGGATTCGTATTTCCGGCGCGCCGGGCACAGGCAAGACCACGGTGCTGCTAAAACGGTTGTCGCAGAAAACCAAGCGTGAGTTTCTGACGGACGAGGAATCTAGCAGCATCCGCGATGAAGATTGGCAGGATGGCAGAAACTGGATGCTTTTCACGCCGAGCGATCTGCTGAAAGTGTATCTCAAAGAGGCGATGGCCAAGGAGCTGTTACCGGCGAGCGATGATCATGTGAAAGTTTATCGCACGTTCCGGTTGGAGCTGCTGCGGGACATCGGATTTATCCGCGTCGGCCAGCACGGCTTTTTCAAGACCGCGACCGAGGGGCTGCAGTTGATGAAGCGCGGTAGCGGCGGCGAGCAGGTCGCGCTTGCCAAGGCGTTTGGAAAATATCTCAACCCGCGTTACACCCAGGCATTTCGTGACGCCTTGCAAAAGTTCAATGACGAAACCCGCGTGCCATTGGGCAAACTGACGGACGCGGCGCAAAAGGTTCTCAACATTGGCTTGGATATTTTGTCCAAACCTCTCGATGACGTCATCGCCTTGCAGCAGGCGCAGCAACGCGCGGCTGGGTATCGTCGGCTGAATGAAAACCTGAACAAAATCATCAGTTCCGTCCGCGCTGTGGCCGCGCTTGAAAGCACCGGCATGGAGCTTACCTTGGCCCGGATTTATCGCCAGACGCGGTTGCTGCCGGGCATTTTGGAATCCTTGACCACATCCAATATGGAGGTCGCCTTGTTCCCGGACATCCCACCGGTTGTGGAAAATCTGCGCCGCCATGTGAAAGATTTGAGCGAGGCGGTCACACTCACGCGACTGTTTCAAATTATCCCGAGAGCCTACCAGGAGTTCCGTGAAACGCCGGATGACCAGAGACGATTCTTCGTTGATGAATGTGAAAAATCCATCAAGGAGCGGGCCTTGTCCGAGCCAGAACAGGATGTCCTTCTGTTCCAAGCGCTGCAATTCGTGCGCGAATTGGCAGACGACATCCCGGCGAACCAGACCGGCGTTCCCGGCGATGTGCGGGCCATCCTTGCCCGGATGCGGATGTTCGTATGCGTGGACGAGGCGGCGGATTTTTCCCCGCTGGAAATCGCCTGCATTGAGCGTTTCGCCAAACTGGGGTCGGGTGGGGTCACCATCTGCGGCGATCTCATGCAACGGGTCACGGAATCGGGCTTGAAGGAGTGGACCGACCTTGCCGATATTTCCGAGCCATACGAAGGCCGCGAGTTGCCCATCAGCTACCGCCAGACCGAACGGTTATTTTCCATCGCCAAAGACCTTTATCGTCATTCGCGCGGGATCGAACCTGATTTTAAATCGGCGTTTCCAAAACGCGCGGAGGATCCACCGCCGTTACTGCATAAAGGCACGGGCGAGCAAACAGCCGAACAATGGCTCACTAATCGGATTTGCGAAATCCACGCCTTGTGCGGCCAGCACCTACCCACGACGGCAATTCTGGTGGCCCATCAGGATGACGTTGAACCACTCAGGCAAAAACTGAAACCCATTTTGTTGGAAAACGGACTTGAGCTTGAGGCGTCGCATGGCGGACAGGCTCTCGGCGATTCGGCCCGCGTCCGCATTTTCCCGGTCGAGTTCATCAAAGGCTTGGAATTTGAAGCGGTCTTTTACGTCGGCCTCGACCGCATGGCGGAAATCCACAAGGATCTCATAGACAAATATGTCTATGTCGGCCTGAGTCGCGCCCGTAGTTTCCTCGGTGTCACCATCGAACGACAGTTTCCGCAGCGCCTCAAGAGCGTTGCCGATCACTTCGTCCAAGATGGAAGTTGGGCGCTAAATCCAGATGCTTGA
PROTEIN sequence
Length: 806
MSEPANPSRTIAEFILGELDHFKKTFRPHGGNLTFHGQTQLTHEPFVGYARVTDKKNVETKLLICRHYTPLNFHARNGNVDFASYLSPLGRVVAKRPGQDHKFQIKTRAGNILEDHHFQLIEKDEFTLHLDGGAWDAVNNQISWIDGRLLARSLRQLLAGKPEEKQIRQLRYSVQLPDQAILDLAQDEIFRLPLRARIRISGAPGTGKTTVLLKRLSQKTKREFLTDEESSSIRDEDWQDGRNWMLFTPSDLLKVYLKEAMAKELLPASDDHVKVYRTFRLELLRDIGFIRVGQHGFFKTATEGLQLMKRGSGGEQVALAKAFGKYLNPRYTQAFRDALQKFNDETRVPLGKLTDAAQKVLNIGLDILSKPLDDVIALQQAQQRAAGYRRLNENLNKIISSVRAVAALESTGMELTLARIYRQTRLLPGILESLTTSNMEVALFPDIPPVVENLRRHVKDLSEAVTLTRLFQIIPRAYQEFRETPDDQRRFFVDECEKSIKERALSEPEQDVLLFQALQFVRELADDIPANQTGVPGDVRAILARMRMFVCVDEAADFSPLEIACIERFAKLGSGGVTICGDLMQRVTESGLKEWTDLADISEPYEGRELPISYRQTERLFSIAKDLYRHSRGIEPDFKSAFPKRAEDPPPLLHKGTGEQTAEQWLTNRICEIHALCGQHLPTTAILVAHQDDVEPLRQKLKPILLENGLELEASHGGQALGDSARVRIFPVEFIKGLEFEAVFYVGLDRMAEIHKDLIDKYVYVGLSRARSFLGVTIERQFPQRLKSVADHFVQDGSWALNPDA*